C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ventral anterior homeobox 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000058702 vax2 7955 - 7:9650962-9688191 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000081620 vax2-001 9650962-9688191 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSDART00000081620
Transcript ID Brain
ENSDART00000081620 0.262±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000976 IEA transcription regulatory region sequence-specific DNA binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0016055 IEA Wnt receptor signaling pathway
GO:0021554 IMP optic nerve development
GO:0030900 ISS forebrain development
GO:0043565 IEA sequence-specific DNA binding
GO:0060041 IMP retina development in camera-type eye
GO:0060042 IGI retina morphogenesis in camera-type eye
GO:0061386 IMP closure of optic fissure
GO:0090259 IMP regulation of retinal ganglion cell axon guidance
GO:1902254 IGI negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000116035 VAX2 ventral anterior homeobox 2 protein_coding Homo_sapiens
ENSMUSG00000034777 Vax2 ventral anterior homeobox 2 protein_coding Mus_musculus

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