C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: homeo box D3a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000059280 hoxd3a 7955 - 9:1927848-1950351 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000082359 hoxd3a-201 1928485-1929889 protein_coding
  ENSDART00000138730 hoxd3a-002 1929784-1950351 processed_transcript
  ENSDART00000146131 hoxd3a-001 1927848-1930031 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000082359ENSDART00000138730ENSDART00000146131
Transcript ID Brain Heart Kidney Muscle
ENSDART00000082359 N/A 0.106±0.00 0.190±0.00 N/A
ENSDART00000138730 0.802±0.09 0.259±0.00 N/A N/A
ENSDART00000146131 0.731±0.00 N/A N/A 0.451±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0004 UCNEbase 9:1732069-2355236
CIL_0006SE CIL_0006SE_0001 CGP 9:1927848-1950351

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000128652 HOXD3 homeobox D3 protein_coding Homo_sapiens
ENSMUSG00000079277 Hoxd3 homeobox D3 protein_coding Mus_musculus

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