C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cullin 4B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000060510 cul4b 7955 + 14:34461165-34480123 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000085295 cul4b-201 34461365-34479591 protein_coding
  ENSDART00000149254 cul4b-001 34461165-34480123 protein_coding
  ENSDART00000149522 cul4b-002 34476736-34479840 retained_intron

Danio rerio EnsemblZv9

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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000085295ENSDART00000149254ENSDART00000149522
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000085295 N/A 2.945±0.00 N/A 1.597±0.00 N/A
ENSDART00000149254 21.717±6.66 19.515±5.89 24.319±0.00 6.102±0.00 5.947±0.00
ENSDART00000149522 N/A 12.907±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016X CIL_00016X_0001 CGP 14:34448790-34480123
CIL_0000GD CIL_0000GD_0001 CGP 14:34461165-34488065

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0031461 IEA cullin-RING ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000158290 CUL4B cullin 4B protein_coding Homo_sapiens
ENSMUSG00000031095 Cul4b cullin 4B protein_coding Mus_musculus

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