C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Cdc42 guanine nucleotide exchange factor (GEF) 9a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000061746 arhgef9a 7955 - 5:23723061-23784381 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000088408 arhgef9a-201 23724245-23754209 protein_coding
  ENSDART00000134393 arhgef9a-003 23735209-23784331 protein_coding
  ENSDART00000142199 arhgef9a-002 23726710-23735462 processed_transcript
  ENSDART00000143878 arhgef9a-001 23723061-23784381 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000088408ENSDART00000134393ENSDART00000143878
Transcript ID Brain Heart Kidney Liver
ENSDART00000088408 N/A 0.277±0.00 0.078±0.00 N/A
ENSDART00000134393 N/A 0.410±0.00 N/A N/A
ENSDART00000143878 11.615±3.01 0.121±0.00 N/A 0.027±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JJ CIL_0003JJ_0001 CGP 5:23723061-23802389

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0035023 IEA regulation of Rho protein signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000131089 ARHGEF9 Cdc42 guanine nucleotide exchange factor (GEF) 9 protein_coding Homo_sapiens
ENSMUSG00000025656 Arhgef9 CDC42 guanine nucleotide exchange factor (GEF) 9 protein_coding Mus_musculus

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