C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: forkhead box G1c
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000068380 foxg1c 7955 - 18:39197659-39198798 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000098868 foxg1c-201 39197659-39198603 protein_coding
  ENSDART00000139352 foxg1c-001 39197659-39198798 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000098868ENSDART00000139352
Transcript ID Brain Heart Kidney Muscle
ENSDART00000098868 N/A 0.229±0.00 0.229±0.00 0.298±0.00
ENSDART00000139352 0.071±0.00 N/A N/A 0.195±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IBA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003690 IBA double-stranded DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003705 IBA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005667 IBA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0007389 IBA pattern specification process
GO:0008134 IBA transcription factor binding
GO:0008301 IBA DNA binding, bending
GO:0009792 IBA embryo development ending in birth or egg hatching
GO:0009888 IBA tissue development
GO:0035058 IBA nonmotile primary cilium assembly
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IBA positive regulation of transcription from RNA polymerase II promoter
GO:0051090 IBA regulation of sequence-specific DNA binding transcription factor activity

Homologs

No Homologs available.

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