C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 5'-3' exoribonuclease 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000069092 xrn2 7955 + 20:48985939-49073598 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000100239 xrn2-201 48986120-49020457 protein_coding
  ENSDART00000100246 xrn2-001 48985939-49073598 protein_coding
  ENSDART00000137314 xrn2-003 49007041-49023831 protein_coding
  ENSDART00000146596 xrn2-002 48986041-49073204 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000100246
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000100246 10.810±7.34 7.599±0.39 14.910±0.00 2.843±0.00 2.871±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007P1 CIL_0007P1_000A UCNEbase 20:48975010-49065915

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004527 IEA exonuclease activity
GO:0004534 IEA 5'-3' exoribonuclease activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006139 IEA nucleobase-containing compound metabolic process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000088930 XRN2 5'-3' exoribonuclease 2 protein_coding Homo_sapiens
ENSMUSG00000027433 Xrn2 5'-3' exoribonuclease 2 protein_coding Mus_musculus

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