C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vesicle-associated membrane protein 3 (cellubrevin)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000070161 vamp3 7955 + 11:41405002-41430774 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000102734 vamp3-201 41405002-41430774 protein_coding
  ENSDART00000134082 vamp3-002 41405058-41429792 processed_transcript
  ENSDART00000137516 vamp3-001 41405002-41430774 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000102734ENSDART00000134082ENSDART00000137516
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000102734 7.511±2.25 38.404±11.54 14.288±6.39 1.053±0.00 21.510±0.00
ENSDART00000134082 N/A 16.773±0.00 N/A 2.405±0.00 N/A
ENSDART00000137516 19.402±10.91 52.635±13.35 32.023±7.93 0.996±0.00 8.480±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019N CIL_00019N_0001 CGP 11:41011852-41430774
CIL_00019M CIL_00019M_0001 CGP 11:41405002-41490992

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000049245 VAMP3 vesicle-associated membrane protein 3 protein_coding Homo_sapiens
ENSMUSG00000028955 Vamp3 vesicle-associated membrane protein 3 protein_coding Mus_musculus

Loading