C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine palmitoyltransferase, small subunit A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000071203 sptssa 7955 - 17:9809279-9815695 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000105117 sptssa-001 9809279-9815695 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000105117
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000105117 5.953±3.11 5.276±4.33 3.305±3.36 2.213±0.00 4.891±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005R9 CIL_0005R9_0001 CGP 17:9776820-9815695
CIL_0005RG CIL_0005RG_0001 CGP 17:9809279-9827362

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004758 ISS serine C-palmitoyltransferase activity
GO:0005783 IEA endoplasmic reticulum
GO:0006629 IEA lipid metabolic process
GO:0006665 IEA sphingolipid metabolic process
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0017059 ISS serine C-palmitoyltransferase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000165389 SPTSSA serine palmitoyltransferase, small subunit A protein_coding Homo_sapiens
ENSMUSG00000044408 Sptssa serine palmitoyltransferase, small subunit A protein_coding Mus_musculus

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