C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 39
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000071465 lrrc39 7955 + 22:16522107-16525842 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000105678 lrrc39-001 16522107-16525842 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyMuscleENSDART00000105678
Transcript ID Heart Kidney Muscle
ENSDART00000105678 21.945±12.72 0.913±0.00 7.197±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007EW CIL_0007EW_0001 CGP 22:16508269-16525842
CIL_0006G0 CIL_0006G0_0001 CGP 22:16522107-16533256

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0045214 IMP sarcomere organization
GO:0055008 IMP cardiac muscle tissue morphogenesis
GO:0060047 IMP heart contraction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000122477 LRRC39 leucine rich repeat containing 39 protein_coding Homo_sapiens
ENSMUSG00000027961 Lrrc39 leucine rich repeat containing 39 protein_coding Mus_musculus

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