C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000071573 LSM5 7955 - 12:14437570-14443081 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000105903 LSM5-001 14437570-14443077 protein_coding
  ENSDART00000134356 LSM5-002 14437775-14442747 protein_coding
  ENSDART00000138363 LSM5-004 14439576-14442997 retained_intron
  ENSDART00000139786 LSM5-003 14437776-14443081 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000105903ENSDART00000138363
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000105903 27.653±6.59 180.313±161.73 197.454±126.38 0.548±0.00 10.710±0.00
ENSDART00000138363 N/A N/A N/A 0.501±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001K8 CIL_0001K8_0001 CGP 12:14417983-14438024

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000106355 LSM5 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) protein_coding Homo_sapiens
ENSMUSG00000091625 Lsm5 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) protein_coding Mus_musculus

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