C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromodomain helicase DNA binding protein 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000075211 chd7 7955 - 2:21562193-21617220 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000016208 chd7-201 21562451-21604435 protein_coding
  ENSDART00000121586 chd7-002 21604249-21615944 protein_coding
  ENSDART00000135230 chd7-001 21562193-21617220 protein_coding
  ENSDART00000136876 chd7-003 21564259-21565078 retained_intron

Danio rerio EnsemblZv9

Genome
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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000016208ENSDART00000135230
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000016208 1.176±0.00 3.037±0.00 N/A 1.086±0.00 1.062±0.00
ENSDART00000135230 3.070±3.40 3.055±2.01 8.754±0.44 0.789±0.00 0.691±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001756 IMP somitogenesis
GO:0001947 IMP heart looping
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0007368 IMP determination of left/right symmetry
GO:0008026 IEA ATP-dependent helicase activity
GO:0014029 IMP neural crest formation
GO:0016787 IEA hydrolase activity
GO:0016817 IEA hydrolase activity, acting on acid anhydrides
GO:0021602 IMP cranial nerve morphogenesis
GO:0030282 IMP bone mineralization
GO:0042472 IMP inner ear morphogenesis
GO:0060041 IMP retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000171316 CHD7 chromodomain helicase DNA binding protein 7 protein_coding Homo_sapiens
ENSMUSG00000041235 Chd7 chromodomain helicase DNA binding protein 7 protein_coding Mus_musculus

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