C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase 42
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000077300 usp42 7955 - 12:18638224-18659764 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000134597 usp42-001 18638224-18659764 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverENSDART00000134597
Transcript ID Brain Kidney Liver
ENSDART00000134597 3.327±1.60 2.060±1.57 0.454±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RJ CIL_0006RJ_0001 CGP 12:18572108-18659764
CIL_0005BI CIL_0005BI_0001 CGP 12:18638224-18670507

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004221 IEA ubiquitin thiolesterase activity
GO:0006508 IEA proteolysis
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008233 IEA peptidase activity
GO:0008234 IEA cysteine-type peptidase activity
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000106346 USP42 ubiquitin specific peptidase 42 protein_coding Homo_sapiens
ENSG00000223443 USP17L2 ubiquitin specific peptidase 17-like family member 2 protein_coding Homo_sapiens
ENSG00000223569 USP17L15 ubiquitin specific peptidase 17-like family member 15 protein_coding Homo_sapiens
ENSG00000225327 USP17L3 ubiquitin specific peptidase 17-like family member 3 protein_coding Homo_sapiens
ENSG00000226430 USP17L7 ubiquitin specific peptidase 17-like family member 7 protein_coding Homo_sapiens
ENSG00000227140 USP17L5 ubiquitin specific peptidase 17-like family member 5 protein_coding Homo_sapiens
ENSG00000227551 USP17L12 ubiquitin specific peptidase 17-like family member 12 protein_coding Homo_sapiens
ENSG00000228856 USP17L30 ubiquitin specific peptidase 17-like family member 30 protein_coding Homo_sapiens
ENSG00000229579 USP17L26 ubiquitin specific peptidase 17-like family member 26 protein_coding Homo_sapiens
ENSG00000230430 USP17L25 ubiquitin specific peptidase 17-like family member 25 protein_coding Homo_sapiens
ENSG00000230549 USP17L1P ubiquitin specific peptidase 17-like family member 1 protein_coding Homo_sapiens
ENSG00000231051 USP17L28 ubiquitin specific peptidase 17-like family member 28 protein_coding Homo_sapiens
ENSG00000231396 USP17L10 ubiquitin specific peptidase 17-like family member 10 protein_coding Homo_sapiens
ENSG00000231637 USP17L29 ubiquitin specific peptidase 17-like family member 29 protein_coding Homo_sapiens
ENSG00000232264 USP17L24 ubiquitin specific peptidase 17-like family member 24 protein_coding Homo_sapiens
ENSG00000232399 USP17L13 ubiquitin specific peptidase 17-like family member 13 protein_coding Homo_sapiens
ENSG00000233136 USP17L11 ubiquitin specific peptidase 17-like family member 11 protein_coding Homo_sapiens
ENSG00000235780 USP17L27 ubiquitin specific peptidase 17-like family member 27 protein_coding Homo_sapiens
ENSG00000236125 USP17L4 ubiquitin specific peptidase 17-like family member 4 protein_coding Homo_sapiens
ENSG00000237038 USP17L8 ubiquitin specific peptidase 17-like family member 8 protein_coding Homo_sapiens
ENSG00000248920 USP17L19 ubiquitin specific peptidase 17-like family member 19 protein_coding Homo_sapiens
ENSG00000248933 USP17L22 ubiquitin specific peptidase 17-like family member 22 protein_coding Homo_sapiens
ENSG00000249104 USP17L17 ubiquitin specific peptidase 17-like family member 17 protein_coding Homo_sapiens
ENSG00000249811 USP17L21 ubiquitin specific peptidase 17-like family member 21 protein_coding Homo_sapiens
ENSG00000250745 USP17L20 ubiquitin specific peptidase 17-like family member 20 protein_coding Homo_sapiens
ENSG00000250844 USP17L18 ubiquitin specific peptidase 17-like family member 18 protein_coding Homo_sapiens
ENSG00000250913 USP17L23 ubiquitin specific peptidase 17-like family member 23 protein_coding Homo_sapiens
ENSMUSG00000043073 Usp17le ubiquitin specific peptidase 17-like E protein_coding Mus_musculus
ENSMUSG00000051306 Usp42 ubiquitin specific peptidase 42 protein_coding Mus_musculus
ENSMUSG00000054568 Usp17la ubiquitin specific peptidase 17-like A protein_coding Mus_musculus
ENSMUSG00000057321 Usp17ld ubiquitin specific peptidase 17-like D protein_coding Mus_musculus
ENSMUSG00000058976 Usp17lc ubiquitin specific peptidase 17-like C protein_coding Mus_musculus
ENSMUSG00000062369 Usp17lb ubiquitin specific peptidase 17-like B protein_coding Mus_musculus

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