C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: info solute carrier family 13 (sodium-dependent citrate transporter), member 5a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000077691 slc13a5a 7955 - 21:38890511-38919814 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000111177 slc13a5a-201 38890763-38919707 protein_coding
  ENSDART00000131315 slc13a5a-002 38914333-38918311 processed_transcript
  ENSDART00000141160 slc13a5a-001 38890511-38919814 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000111177ENSDART00000131315ENSDART00000141160
Transcript ID Brain Heart Liver Muscle
ENSDART00000111177 N/A 0.234±0.00 12.073±0.00 0.448±0.00
ENSDART00000131315 N/A 0.103±0.00 N/A N/A
ENSDART00000141160 0.530±0.05 0.752±0.00 8.249±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033A CIL_00033A_0001 CGP 21:38881606-38919814

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0006814 IEA sodium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000141485 SLC13A5 solute carrier family 13 (sodium-dependent citrate transporter), member 5 protein_coding Homo_sapiens
ENSMUSG00000020805 Slc13a5 solute carrier family 13 (sodium-dependent citrate transporter), member 5 protein_coding Mus_musculus

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