C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NLR family, pyrin domain containing 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000087518 si:dkey-261p22.1 7955 - 4:40127358-40170504 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000101961 si:dkey-261p22.1-201 40150873-40165649 protein_coding
  ENSDART00000136694 si:dkey-261p22.1-002 40165108-40170504 retained_intron
  ENSDART00000147130 si:dkey-261p22.1-001 40127358-40170487 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000101961ENSDART00000147130
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000101961 0.146±0.09 0.103±0.00 N/A 0.043±0.00 0.069±0.00
ENSDART00000147130 N/A 0.064±0.01 0.144±0.00 N/A 0.030±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000174885 NLRP6 NLR family, pyrin domain containing 6 protein_coding Homo_sapiens
ENSMUSG00000038745 Nlrp6 NLR family, pyrin domain containing 6 protein_coding Mus_musculus

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