C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NLR family, pyrin domain containing 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000087788 si:ch211-22k7.9 7955 + 4:33031405-33055809 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000121804 si:ch211-22k7.9-201 33039051-33055601 protein_coding
  ENSDART00000133901 si:ch211-22k7.9-002 33031405-33055807 protein_coding
  ENSDART00000150371 si:ch211-22k7.9-003 33031413-33055809 protein_coding
  ENSDART00000150641 si:ch211-22k7.9-004 33053051-33055192 retained_intron

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000121804ENSDART00000133901ENSDART00000150371
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000121804 0.245±0.17 0.130±0.01 0.399±0.00 0.025±0.00 0.284±0.00
ENSDART00000133901 N/A 0.076±0.05 N/A N/A N/A
ENSDART00000150371 0.140±0.12 0.089±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000174885 NLRP6 NLR family, pyrin domain containing 6 protein_coding Homo_sapiens
ENSMUSG00000038745 Nlrp6 NLR family, pyrin domain containing 6 protein_coding Mus_musculus

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