C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pre-B-cell leukemia transcription factor 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000089550 pbx1b 7955 + 6:2064421-2193122 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000122028 pbx1b-201 2064421-2193122 protein_coding
  ENSDART00000125538 pbx1b-202 2064421-2193122 protein_coding
  ENSDART00000129503 pbx1b-203 2064454-2193121 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverMuscleENSDART00000122028ENSDART00000129503
Transcript ID Brain Kidney Liver Muscle
ENSDART00000122028 N/A N/A 0.034±0.00 0.208±0.00
ENSDART00000129503 0.685±0.00 0.351±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007M6 CIL_0007M6_0005 UCNEbase 6:2040548-2134418

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001944 IMP vasculature development
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0030223 IMP neutrophil differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0048795 IMP swim bladder morphogenesis
GO:0060216 IMP definitive hemopoiesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000185630 PBX1 pre-B-cell leukemia homeobox 1 protein_coding Homo_sapiens
ENSMUSG00000052534 Pbx1 pre B cell leukemia homeobox 1 protein_coding Mus_musculus

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