C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coatomer protein complex, subunit zeta 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000005243 COPZ2 9606 - 17:48026167-48038030 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000579263 COPZ2-006 48031646-48033872 protein_coding
  ENST00000580174 COPZ2-002 48033892-48038030 protein_coding
  ENST00000580409 COPZ2-008 48026167-48029425 retained_intron
  ENST00000581637 COPZ2-005 48026167-48036902 nonsense_mediated_decay
  ENST00000581756 COPZ2-003 48026167-48036906 protein_coding
  ENST00000583414 COPZ2-010 48026167-48033252 nonsense_mediated_decay
  ENST00000584955 COPZ2-009 48026174-48033282 nonsense_mediated_decay
  ENST00000585182 COPZ2-007 48026171-48028560 retained_intron
  ENST00000612370 COPZ2-004 48026182-48037773 processed_transcript
  ENST00000621465 COPZ2-001 48026171-48037782 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000579263ENST00000583414ENST00000584955ENST00000585182ENST00000621465
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000579263 N/A 2.972±0.00 N/A N/A N/A N/A N/A 1.989±0.00 N/A 0.410±0.00 N/A N/A N/A 4.423±0.00
ENST00000583414 11.031±0.00 9.874±0.00 N/A N/A 26.055±0.00 24.896±0.00 N/A 4.901±0.00 N/A N/A N/A 9.607±2.42 7.420±1.60 12.498±0.00
ENST00000584955 7.675±0.00 N/A 0.618±0.00 4.811±0.00 13.178±12.39 N/A 3.541±0.00 3.592±0.00 11.092±0.00 1.606±0.00 14.131±0.00 N/A 4.167±0.00 7.370±1.50
ENST00000585182 N/A N/A N/A N/A N/A N/A N/A 2.569±0.00 N/A N/A 13.361±0.00 N/A N/A N/A
ENST00000621465 26.916±0.00 9.069±0.00 0.137±0.00 4.765±0.00 25.598±25.16 9.658±8.34 7.096±6.10 5.895±0.00 11.273±5.39 9.467±8.50 26.345±0.00 15.804±6.55 33.304±22.93 16.553±1.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RQ CIL_0007RQ_0001 VISTA 17:47700006-48306250
CIL_0007WA CIL_0007WA_0001 VISTA 17:47751636-48352675
CIL_00097B CIL_00097B_0001 VISTA 17:47849190-48450331

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005801 NAS cis-Golgi network
GO:0006810 IEA transport
GO:0006886 NAS intracellular protein transport
GO:0015031 IEA protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0030126 NAS COPI vesicle coat

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000018672 Copz2 coatomer protein complex, subunit zeta 2 protein_coding Mus_musculus

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