C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytochrome b561
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000008283 CYB561 9606 - 17:63432304-63446378 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000360793 CYB561-001 63432304-63446378 protein_coding
  ENST00000392975 CYB561-005 63432304-63440866 protein_coding
  ENST00000392976 CYB561-201 63432307-63446184 protein_coding
  ENST00000448884 CYB561-009 63433564-63446291 protein_coding
  ENST00000542042 CYB561-006 63434140-63438311 protein_coding
  ENST00000577368 CYB561-013 63435415-63446306 retained_intron
  ENST00000577989 CYB561-012 63434478-63446308 processed_transcript
  ENST00000578016 CYB561-018 63435558-63446340 processed_transcript
  ENST00000578072 CYB561-011 63435712-63446354 protein_coding
  ENST00000580592 CYB561-021 63437372-63440839 protein_coding
  ENST00000580691 CYB561-007 63434192-63438170 protein_coding
  ENST00000581163 CYB561-015 63434261-63436706 processed_transcript
  ENST00000581573 CYB561-008 63433216-63437949 protein_coding
  ENST00000582034 CYB561-002 63433964-63446306 protein_coding
  ENST00000582143 CYB561-016 63434331-63435399 retained_intron
  ENST00000582297 CYB561-019 63433145-63446294 protein_coding
  ENST00000582997 CYB561-020 63434314-63440211 protein_coding
  ENST00000583478 CYB561-010 63437087-63446331 retained_intron
  ENST00000584031 CYB561-004 63432305-63446184 protein_coding
  ENST00000584291 CYB561-014 63434403-63442852 protein_coding
  ENST00000585153 CYB561-017 63433909-63435184 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000360793ENST00000392975ENST00000392976ENST00000448884ENST00000577989ENST00000578016ENST00000582034ENST00000584291ENST00000585153
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000360793 3.566±0.00 4.588±0.00 N/A 2.482±1.78 7.915±0.00 1.964±0.68 N/A 7.665±0.00 3.114±0.00 10.086±0.00 13.109±6.59 5.920±1.88 5.097±0.33
ENST00000392975 N/A N/A N/A N/A 1.215±0.00 N/A N/A N/A N/A 1.416±0.00 N/A N/A N/A
ENST00000392976 N/A N/A N/A 1.191±0.15 N/A N/A 0.955±0.00 N/A 1.191±0.00 N/A 10.641±9.03 8.633±0.00 N/A
ENST00000448884 N/A N/A N/A 1.371±0.00 1.031±0.00 1.625±0.00 N/A N/A 1.448±0.00 N/A N/A N/A N/A
ENST00000577989 N/A N/A N/A N/A N/A N/A N/A N/A 2.594±0.00 N/A N/A N/A N/A
ENST00000578016 N/A N/A N/A N/A N/A N/A 1.159±0.00 1.626±0.00 N/A N/A 6.281±0.00 N/A N/A
ENST00000582034 N/A N/A 2.309±0.00 N/A N/A N/A N/A N/A 0.949±0.00 N/A N/A N/A N/A
ENST00000584291 N/A N/A N/A 3.449±0.00 N/A N/A N/A N/A N/A 3.654±0.00 N/A N/A N/A
ENST00000585153 N/A N/A 0.908±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000562 CIL_000562_0002 CGP 17:63009556-63446378
CIL_0009B9 CIL_0009B9_0001 VISTA 17:63374232-63977730
CIL_0006ZU CIL_0006ZU_0001 CGP 17:63432304-63498380

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000293 IEA:ISS ferric-chelate reductase activity
GO:0016021 IEA:NAS integral component of membrane
GO:0022865 IEA:NAS transmembrane electron transfer carrier
GO:0022900 IEA:NAS electron transport chain
GO:0046872 IEA metal ion binding
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038176 cyb561 cytochrome b-561 protein_coding Danio_rerio
ENSMUSG00000019590 Cyb561 cytochrome b-561 protein_coding Mus_musculus

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