C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein-O-mannosyltransferase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000009830 POMT2 9606 - 14:77274956-77320884 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261534 POMT2-001 77274956-77320884 protein_coding
  ENST00000452340 POMT2-003 77274958-77320704 retained_intron
  ENST00000553863 POMT2-009 77299478-77306503 processed_transcript
  ENST00000553880 POMT2-014 77285281-77291367 retained_intron
  ENST00000554564 POMT2-017 77280306-77284363 retained_intron
  ENST00000554767 POMT2-004 77274958-77301163 retained_intron
  ENST00000554884 POMT2-015 77284969-77287824 processed_transcript
  ENST00000554948 POMT2-005 77301222-77320340 protein_coding
  ENST00000555134 POMT2-021 77278813-77285603 retained_intron
  ENST00000555675 POMT2-010 77301089-77306490 retained_intron
  ENST00000555710 POMT2-019 77277415-77280074 nonsense_mediated_decay
  ENST00000555788 POMT2-006 77304694-77312379 processed_transcript
  ENST00000556171 POMT2-018 77278773-77283852 protein_coding
  ENST00000556326 POMT2-002 77299524-77320860 nonsense_mediated_decay
  ENST00000556394 POMT2-022 77276991-77279909 protein_coding
  ENST00000556404 POMT2-016 77285567-77287209 retained_intron
  ENST00000556446 POMT2-020 77278286-77279061 retained_intron
  ENST00000556851 POMT2-013 77286748-77291493 retained_intron
  ENST00000556880 POMT2-008 77302834-77306897 processed_transcript
  ENST00000557289 POMT2-011 77296164-77304746 nonsense_mediated_decay
  ENST00000557525 POMT2-007 77304773-77312635 retained_intron
  ENST00000557675 POMT2-012 77285480-77296507 processed_transcript
  ENST00000602717 POMT2-023 77276983-77279932 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261534ENST00000452340ENST00000554767ENST00000556326ENST00000557675
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261534 1.447±0.00 2.611±1.89 3.804±0.00 0.940±0.51 1.405±0.00 3.049±0.00 N/A N/A 7.526±0.00 1.889±1.17 4.228±0.83 6.282±0.00
ENST00000452340 N/A N/A N/A N/A N/A N/A N/A 1.019±0.00 N/A 1.173±0.19 N/A 12.434±0.00
ENST00000554767 N/A N/A N/A N/A 0.201±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000556326 N/A N/A N/A N/A N/A N/A 3.261±0.00 N/A N/A N/A N/A N/A
ENST00000557675 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.414±0.00 7.216±0.00 53.313±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VT CIL_0007VT_0001 VISTA 14:76740528-77345010
CIL_0003OZ CIL_0003OZ_0001 CGP 14:77265483-77320884
CIL_0003P2 CIL_0003P2_0001 CGP 14:77274956-77331597

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000030 IEA mannosyltransferase activity
GO:0004169 IEA dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005783 IEA endoplasmic reticulum
GO:0006493 IEA protein O-linked glycosylation
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0035269 IEA protein O-linked mannosylation
GO:0046872 IEA metal ion binding
GO:0097502 IEA mannosylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055027 pomt2 protein-O-mannosyltransferase 2 protein_coding Danio_rerio
ENSMUSG00000034126 Pomt2 protein-O-mannosyltransferase 2 protein_coding Mus_musculus

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