C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PHD finger protein 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000010318 PHF7 9606 + 3:52410561-52423641 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000327906 PHF7-001 52410657-52423641 protein_coding
  ENST00000347025 PHF7-004 52411197-52423640 protein_coding
  ENST00000459935 PHF7-009 52421016-52422857 retained_intron
  ENST00000461861 PHF7-011 52414523-52423640 protein_coding
  ENST00000465863 PHF7-010 52420992-52423406 protein_coding
  ENST00000472337 PHF7-008 52412854-52420995 processed_transcript
  ENST00000473145 PHF7-007 52410890-52414844 retained_intron
  ENST00000482327 PHF7-012 52411036-52414836 processed_transcript
  ENST00000498509 PHF7-003 52419920-52423283 retained_intron
  ENST00000614886 PHF7-201 52412811-52423640 protein_coding
  ENST00000615126 PHF7-202 52412901-52423640 protein_coding
  ENST00000620464 PHF7-203 52410561-52423640 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327906ENST00000347025ENST00000461861ENST00000465863ENST00000473145ENST00000482327ENST00000498509ENST00000614886ENST00000615126ENST00000620464
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327906 3.924±0.00 0.977±0.00 N/A N/A 1.323±0.00 N/A N/A N/A N/A N/A N/A 0.520±0.00 0.331±0.01 862.630±383.27
ENST00000347025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.381±0.00 0.785±0.10 N/A
ENST00000461861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 235.285±0.00
ENST00000465863 N/A N/A N/A N/A N/A N/A N/A N/A 0.499±0.00 N/A N/A N/A N/A N/A
ENST00000473145 N/A N/A N/A N/A 1.515±0.00 0.417±0.00 0.659±0.00 0.809±0.00 0.924±0.00 1.200±0.00 0.613±0.16 1.025±0.13 1.095±0.70 N/A
ENST00000482327 N/A 2.420±0.00 1.013±0.00 2.741±0.77 N/A N/A 2.958±0.00 1.951±0.00 0.586±0.00 2.816±0.00 0.755±0.17 1.778±0.40 0.972±0.49 1332.040±0.00
ENST00000498509 N/A 0.753±0.00 N/A N/A N/A N/A N/A 0.355±0.00 N/A N/A N/A N/A N/A N/A
ENST00000614886 N/A N/A N/A N/A 1.089±0.00 0.610±0.00 N/A N/A N/A N/A N/A N/A N/A 195.886±0.00
ENST00000615126 N/A N/A N/A N/A N/A 0.641±0.00 N/A 0.220±0.00 0.191±0.00 N/A N/A 0.157±0.00 N/A N/A
ENST00000620464 N/A 1.216±0.00 N/A N/A N/A N/A N/A N/A 0.563±0.00 0.657±0.00 N/A N/A 0.105±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0001 VISTA 3:52127966-52731115

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000021902 Phf7 PHD finger protein 7 protein_coding Mus_musculus

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