C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 200
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000010539 ZNF200 9606 - 16:3222325-3236221 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000396868 ZNF200-003 3222325-3235360 protein_coding
  ENST00000396870 ZNF200-004 3223336-3235186 protein_coding
  ENST00000396871 ZNF200-002 3222342-3235457 protein_coding
  ENST00000414144 ZNF200-001 3222325-3235456 protein_coding
  ENST00000431561 ZNF200-005 3222345-3235167 protein_coding
  ENST00000575285 ZNF200-007 3223498-3227805 retained_intron
  ENST00000575617 ZNF200-008 3233627-3236221 protein_coding
  ENST00000575630 ZNF200-010 3232431-3234195 retained_intron
  ENST00000575948 ZNF200-006 3223892-3235070 protein_coding
  ENST00000577015 ZNF200-009 3234795-3236003 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396868ENST00000396870ENST00000396871ENST00000414144ENST00000431561ENST00000575285ENST00000575948
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396868 N/A N/A N/A 0.262±0.00 N/A N/A 0.385±0.00 N/A 0.352±0.00 N/A 0.194±0.00 N/A N/A 1.744±0.00
ENST00000396870 0.702±0.00 2.249±0.00 0.139±0.00 1.093±0.00 0.685±0.00 0.311±0.00 0.708±0.47 0.575±0.37 0.538±0.06 0.399±0.00 0.571±0.14 1.081±0.28 0.993±0.36 N/A
ENST00000396871 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A
ENST00000414144 N/A N/A N/A N/A N/A N/A N/A 0.491±0.00 0.295±0.00 N/A N/A 0.949±0.20 0.260±0.00 1.823±0.00
ENST00000431561 0.354±0.00 N/A 0.070±0.00 N/A 0.459±0.00 0.533±0.00 N/A 0.893±0.00 N/A N/A N/A 0.517±0.14 0.920±0.23 3.597±2.22
ENST00000575285 0.110±0.00 N/A 0.087±0.00 0.262±0.10 0.213±0.00 N/A 0.099±0.06 0.422±0.00 0.109±0.05 N/A 0.079±0.00 0.157±0.00 N/A 1.100±0.00
ENST00000575948 N/A N/A N/A N/A 0.496±0.00 0.683±0.08 0.144±0.00 N/A N/A 0.496±0.00 N/A 0.761±0.00 0.351±0.00 4.808±1.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00029F CIL_00029F_0002 CGP 16:3222325-3256627

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079203 CR352258.1 Uncharacterized protein protein_coding Danio_rerio

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