C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin protein ligase E3 component n-recognin 7 (putative)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000012963 UBR7 9606 + 14:93207056-93229215 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000013070 UBR7-001 93207056-93229215 protein_coding
  ENST00000416753 UBR7-201 93207056-93229209 protein_coding
  ENST00000553674 UBR7-002 93207243-93227118 nonsense_mediated_decay
  ENST00000553857 UBR7-007 93209897-93227024 protein_coding
  ENST00000554232 UBR7-004 93207241-93218557 protein_coding
  ENST00000555113 UBR7-005 93207294-93215199 protein_coding
  ENST00000555329 UBR7-006 93218681-93227225 protein_coding
  ENST00000556871 UBR7-003 93207243-93218674 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000013070ENST00000416753ENST00000553674ENST00000555113
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000013070 3.943±0.00 2.640±0.00 0.448±0.00 3.394±0.00 2.483±0.00 2.453±0.00 3.075±0.00 2.759±0.68 2.256±0.90 1.864±0.00 2.130±0.07 4.399±1.29 5.374±2.43 12.204±4.77
ENST00000416753 3.325±0.00 N/A N/A 7.675±0.00 3.493±0.00 4.110±0.00 2.306±0.00 2.517±0.00 0.928±0.00 1.344±0.00 4.158±0.00 3.434±0.00 N/A N/A
ENST00000553674 N/A N/A 1.036±0.00 N/A 1.621±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 16.593±3.48
ENST00000555113 N/A N/A 2.606±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003MM CIL_0003MM_0001 CGP 14:93202894-93229215
CIL_00061C CIL_00061C_0002 CGP 14:93207056-93333092

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005536 ubr7 ubiquitin protein ligase E3 component n-recognin 7 protein_coding Danio_rerio
ENSMUSG00000041712 Ubr7 ubiquitin protein ligase E3 component n-recognin 7 (putative) protein_coding Mus_musculus

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