C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger CCCH-type containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000014164 ZC3H3 9606 - 8:143437655-143541453 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262577 ZC3H3-001 143437655-143541453 protein_coding
  ENST00000528401 ZC3H3-002 143484497-143507840 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262577
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262577 6.128±0.00 7.590±0.00 2.178±2.00 2.970±2.19 2.205±2.03 2.982±0.00 7.169±0.00 1.967±1.41 3.597±2.45 8.447±7.47 7.076±5.51 5.915±2.73 11.623±5.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0001 VISTA 8:143231340-143832399
CIL_0000X0 CIL_0000X0_0002 CGP 8:143419182-143541453
CIL_0001NJ CIL_0001NJ_0001 CGP 8:143437655-143563062

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IDA nucleus
GO:0006378 IMP mRNA polyadenylation
GO:0010793 IMP regulation of mRNA export from nucleus
GO:0016973 IMP poly(A)+ mRNA export from nucleus
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090751 zc3h3 zinc finger CCCH-type containing 3 protein_coding Danio_rerio
ENSMUSG00000055452 Gm7353 predicted pseudogene 7353 protein_coding Mus_musculus
ENSMUSG00000075600 Zc3h3 zinc finger CCCH type containing 3 protein_coding Mus_musculus

Loading