C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 839
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000022976 ZNF839 9606 + 14:102317377-102342702 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000420933 ZNF839-008 102336917-102342367 processed_transcript
  ENST00000442396 ZNF839-012 102319751-102342367 protein_coding
  ENST00000557803 ZNF839-007 102334933-102342367 retained_intron
  ENST00000558462 ZNF839-010 102331714-102342364 protein_coding
  ENST00000558490 ZNF839-006 102331692-102342367 protein_coding
  ENST00000558850 ZNF839-001 102317377-102342364 protein_coding
  ENST00000559098 ZNF839-003 102319958-102342367 nonsense_mediated_decay
  ENST00000559155 ZNF839-005 102331639-102342367 protein_coding
  ENST00000559185 ZNF839-002 102319298-102342367 protein_coding
  ENST00000560112 ZNF839-011 102335688-102341976 protein_coding
  ENST00000560568 ZNF839-009 102331522-102338830 protein_coding
  ENST00000561251 ZNF839-004 102326828-102342702 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartMuscleOvaryPlacentaTestisENST00000442396ENST00000557803ENST00000558490ENST00000559185ENST00000560568
Transcript ID Adrenal Breast Colon Heart Muscle Ovary Placenta Testis
ENST00000442396 3.087±0.00 2.366±0.00 N/A N/A 2.530±0.00 2.318±0.61 1.845±0.20 5.690±0.00
ENST00000557803 N/A N/A 0.477±0.00 N/A N/A N/A N/A N/A
ENST00000558490 N/A N/A N/A N/A 2.707±0.00 N/A N/A N/A
ENST00000559185 N/A N/A N/A 0.941±0.00 N/A N/A N/A N/A
ENST00000560568 N/A N/A 2.110±0.00 2.524±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040O CIL_00040O_0001 CGP 14:102224500-102342702
CIL_00040P CIL_00040P_0001 CGP 14:102317377-102362916

Gene Ontology
GO IDEvidence TypeGO Description
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076988 znf839 zinc finger protein 839 protein_coding Danio_rerio
ENSMUSG00000021271 Zfp839 zinc finger protein 839 protein_coding Mus_musculus

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