C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH2 domain containing 2A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000027869 SH2D2A 9606 - 1:156806243-156816862 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000368198 SH2D2A-002 156806243-156816834 protein_coding
  ENST00000368199 SH2D2A-001 156806243-156816862 protein_coding
  ENST00000392306 SH2D2A-201 156806244-156816848 protein_coding
  ENST00000468744 SH2D2A-005 156809203-156814111 processed_transcript
  ENST00000486350 SH2D2A-004 156809661-156815411 processed_transcript
  ENST00000495306 SH2D2A-003 156814498-156816760 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000368198ENST00000368199ENST00000392306ENST00000468744ENST00000486350ENST00000495306
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000368198 0.530±0.00 2.492±0.00 N/A 0.211±0.00 0.073±0.00 0.694±0.00 0.205±0.00 0.281±0.00 N/A 1.551±1.33 0.097±0.00 0.143±0.00 N/A N/A
ENST00000368199 N/A N/A 0.020±0.00 N/A N/A N/A N/A 0.276±0.00 0.384±0.00 N/A N/A N/A 0.938±0.08 N/A
ENST00000392306 N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.355±0.00 0.295±0.00
ENST00000468744 0.398±0.00 1.849±0.00 N/A N/A N/A N/A 0.340±0.00 0.324±0.00 N/A N/A N/A N/A N/A N/A
ENST00000486350 N/A N/A N/A N/A 0.086±0.00 0.084±0.00 N/A N/A N/A N/A N/A 0.892±0.00 0.349±0.00 0.217±0.00
ENST00000495306 N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A 1.363±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000850 CIL_000850_0001 VISTA 1:156360457-156965492

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0005070 TAS SH3/SH2 adaptor activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0007165 TAS signal transduction
GO:0008283 IEA cell proliferation
GO:0009967 TAS positive regulation of signal transduction
GO:0017124 IEA SH3 domain binding
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089983 SH2D2A SH2 domain containing 2A protein_coding Danio_rerio
ENSMUSG00000028071 Sh2d2a SH2 domain containing 2A protein_coding Mus_musculus

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