C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 13, member B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000031003 FAM13B 9606 - 5:137937960-138051961 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000033079 FAM13B-001 137937960-138033031 protein_coding
  ENST00000420893 FAM13B-003 137940181-138033085 protein_coding
  ENST00000425075 FAM13B-002 137940172-138033086 protein_coding
  ENST00000502471 FAM13B-007 138018386-138051961 protein_coding
  ENST00000505281 FAM13B-010 137953346-137954624 retained_intron
  ENST00000505961 FAM13B-005 138018955-138034073 protein_coding
  ENST00000508403 FAM13B-006 138018479-138051915 protein_coding
  ENST00000509596 FAM13B-008 138018409-138034028 protein_coding
  ENST00000510804 FAM13B-009 138020763-138032928 retained_intron
  ENST00000513640 FAM13B-011 137943195-137946395 retained_intron
  ENST00000514310 FAM13B-004 138011890-138038606 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000033079ENST00000420893ENST00000425075
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000033079 2.151±0.00 5.330±0.00 N/A 3.843±1.60 2.651±1.37 2.184±0.00 5.226±0.00 4.378±0.00 N/A 0.837±0.00 1.757±1.25 2.313±1.09 11.344±3.97
ENST00000420893 N/A N/A N/A 6.422±0.00 1.701±0.00 N/A N/A N/A N/A N/A N/A N/A 6.072±0.00
ENST00000425075 N/A N/A 0.755±0.00 2.716±0.00 4.132±0.00 1.657±0.00 0.901±0.00 1.645±0.86 2.714±0.00 2.674±0.00 2.263±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OZ CIL_0005OZ_0001 CGP 5:137887968-138051961
CIL_0005OW CIL_0005OW_0001 CGP 5:137937960-138092365

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076779 fam13b family with sequence similarity 13, member B protein_coding Danio_rerio
ENSMUSG00000036501 Fam13b family with sequence similarity 13, member B protein_coding Mus_musculus

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