C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 4, sodium bicarbonate cotransporter, member 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000033867 SLC4A7 9606 - 3:27372721-27484420 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295736 SLC4A7-001 27372723-27456754 protein_coding
  ENST00000419036 SLC4A7-003 27372723-27424086 protein_coding
  ENST00000425128 SLC4A7-201 27372721-27484420 protein_coding
  ENST00000428005 SLC4A7-012 27423641-27484420 retained_intron
  ENST00000428179 SLC4A7-013 27385892-27456754 protein_coding
  ENST00000428386 SLC4A7-002 27372723-27456754 protein_coding
  ENST00000437179 SLC4A7-005 27376606-27484347 protein_coding
  ENST00000437266 SLC4A7-007 27376764-27484420 nonsense_mediated_decay
  ENST00000438530 SLC4A7-009 27376606-27484347 nonsense_mediated_decay
  ENST00000440156 SLC4A7-006 27376606-27484347 protein_coding
  ENST00000445684 SLC4A7-010 27376606-27484396 protein_coding
  ENST00000446700 SLC4A7-011 27376606-27484347 protein_coding
  ENST00000454389 SLC4A7-014 27376606-27484347 protein_coding
  ENST00000455077 SLC4A7-004 27376606-27484347 protein_coding
  ENST00000457377 SLC4A7-008 27376606-27484347 nonsense_mediated_decay
  ENST00000465487 SLC4A7-017 27376729-27391845 retained_intron
  ENST00000475120 SLC4A7-016 27397865-27401044 retained_intron
  ENST00000491211 SLC4A7-015 27421672-27424502 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295736ENST00000419036ENST00000425128ENST00000428005ENST00000428386ENST00000437179ENST00000437266ENST00000440156ENST00000445684ENST00000446700ENST00000454389ENST00000455077ENST00000457377ENST00000465487
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295736 N/A N/A N/A N/A N/A 0.411±0.00 0.563±0.04 N/A N/A N/A N/A N/A N/A 0.378±0.00
ENST00000419036 N/A 1.265±0.00 N/A 1.139±0.48 2.024±0.00 N/A 0.717±0.00 1.406±0.00 N/A 1.463±0.00 0.179±0.00 0.431±0.06 0.283±0.00 0.449±0.00
ENST00000425128 N/A N/A N/A N/A N/A N/A N/A 1.019±0.00 N/A 0.946±0.00 N/A N/A N/A 1.012±0.00
ENST00000428005 N/A N/A 1.512±0.00 N/A 3.913±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428386 0.588±0.00 N/A 1.090±0.00 N/A 1.225±0.54 0.872±0.00 N/A 1.721±0.00 0.182±0.00 1.496±0.04 0.676±0.00 0.950±0.00 0.818±0.67 2.338±0.00
ENST00000437179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.569±0.00 N/A
ENST00000437266 N/A N/A N/A 4.497±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440156 N/A N/A N/A N/A N/A 1.573±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445684 N/A N/A N/A N/A N/A N/A 1.576±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000446700 N/A N/A N/A N/A N/A N/A 1.124±0.00 N/A N/A N/A 1.041±0.00 N/A N/A N/A
ENST00000454389 N/A N/A N/A N/A N/A N/A N/A N/A 3.757±0.00 N/A N/A N/A N/A N/A
ENST00000455077 N/A N/A N/A 4.117±0.00 N/A N/A N/A N/A N/A 1.349±0.00 N/A 4.908±0.00 N/A N/A
ENST00000457377 N/A N/A N/A N/A 2.498±0.00 2.211±0.00 N/A N/A N/A N/A N/A N/A N/A 2.088±0.00
ENST00000465487 N/A N/A 6.367±0.00 25.059±0.00 11.044±0.00 10.233±0.00 N/A 2.684±0.00 N/A 7.070±0.00 N/A 4.145±0.00 7.878±0.00 14.191±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005452 IEA inorganic anion exchanger activity
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0006811 TAS ion transport
GO:0006820 IEA anion transport
GO:0008509 IEA anion transmembrane transporter activity
GO:0008510 NAS sodium:bicarbonate symporter activity
GO:0015701 NAS bicarbonate transport
GO:0016020 IEA membrane
GO:0016021 NAS:IEA integral component of membrane
GO:0016324 IEA apical plasma membrane
GO:0021747 IEA cochlear nucleus development
GO:0035725 NAS sodium ion transmembrane transport
GO:0042995 IEA cell projection
GO:0046666 IEA retinal cell programmed cell death
GO:0055085 TAS transmembrane transport
GO:0060117 IEA auditory receptor cell development
GO:0061299 IEA retina vasculature morphogenesis in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073952 SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 protein_coding Danio_rerio
ENSMUSG00000021733 Slc4a7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 protein_coding Mus_musculus

Loading