C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: centlein, centrosomal protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000044459 CNTLN 9606 + 9:17134982-17503923 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000380641 CNTLN-004 17135040-17302051 protein_coding
  ENST00000380647 CNTLN-001 17134982-17503923 protein_coding
  ENST00000461247 CNTLN-002 17415818-17462984 processed_transcript
  ENST00000484374 CNTLN-003 17134982-17168556 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380641ENST00000380647ENST00000484374
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380641 0.895±0.00 1.255±0.00 1.493±0.00 0.415±0.15 0.963±0.35 0.566±0.28 0.346±0.02 1.682±1.25 1.027±0.44 0.875±0.56 0.181±0.01 0.628±0.33 0.516±0.21 1.792±0.78
ENST00000380647 0.971±0.00 N/A 0.206±0.00 0.330±0.08 0.945±0.36 1.182±0.80 0.520±0.00 N/A 0.523±0.04 1.042±0.71 N/A 1.815±0.51 0.584±0.49 1.487±0.78
ENST00000484374 0.520±0.00 N/A N/A N/A N/A N/A N/A 0.445±0.00 0.409±0.00 0.229±0.00 N/A N/A N/A 0.744±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PP CIL_0007PP_0001 UCNEbase 9:15728012-17487698
CIL_000148 CIL_000148_0001 CGP 9:16409503-17503923
CIL_0008E9 CIL_0008E9_0001 VISTA 9:17022202-17624373
CIL_0007VQ CIL_0007VQ_0001 VISTA 9:17031973-17632582
CIL_00013X CIL_00013X_0001 CGP 9:17134982-17797129

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000155 IEA phosphorelay sensor kinase activity
GO:0000160 IEA phosphorelay signal transduction system
GO:0005737 IDA cytoplasm
GO:0005814 IDA centriole
GO:0010457 IMP centriole-centriole cohesion
GO:0016020 IEA membrane
GO:0019901 IPI protein kinase binding
GO:0019904 IPI protein domain specific binding
GO:0023014 IEA signal transduction by phosphorylation
GO:0030674 IMP protein binding, bridging
GO:0033365 IMP protein localization to organelle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033345 cntln centlein, centrosomal protein protein_coding Danio_rerio
ENSMUSG00000038070 Cntln centlein, centrosomal protein protein_coding Mus_musculus

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