C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 22A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000054611 TBC1D22A 9606 + 22:46762617-47175699 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337137 TBC1D22A-001 46762621-47175693 protein_coding
  ENST00000355704 TBC1D22A-003 46762681-47174086 protein_coding
  ENST00000380995 TBC1D22A-201 46762617-47175699 protein_coding
  ENST00000394449 TBC1D22A-004 46762683-47174087 nonsense_mediated_decay
  ENST00000406733 TBC1D22A-006 46773927-47174092 protein_coding
  ENST00000407381 TBC1D22A-002 46762672-47174083 protein_coding
  ENST00000441162 TBC1D22A-005 46763742-47174092 nonsense_mediated_decay
  ENST00000441936 TBC1D22A-008 46762651-46793675 nonsense_mediated_decay
  ENST00000472791 TBC1D22A-009 46763266-46793775 processed_transcript
  ENST00000486163 TBC1D22A-010 46762659-46793671 processed_transcript
  ENST00000496139 TBC1D22A-007 46762687-46793616 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337137ENST00000355704ENST00000394449ENST00000406733ENST00000407381
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337137 2.875±0.00 2.890±0.00 N/A 1.907±0.54 3.456±0.00 2.551±1.60 2.789±0.00 1.947±0.00 1.062±0.54 2.073±0.00 4.086±0.00 3.807±1.48 6.823±0.69 3.031±0.00
ENST00000355704 N/A N/A N/A N/A 3.299±0.00 N/A N/A N/A N/A 2.758±0.00 1.653±1.30 N/A N/A N/A
ENST00000394449 4.795±0.00 4.481±0.00 N/A 2.289±0.00 3.262±0.00 N/A 1.950±1.47 4.422±0.00 1.878±0.80 3.954±0.00 3.754±0.00 8.749±4.92 13.174±1.36 6.285±2.87
ENST00000406733 N/A N/A 1.344±0.00 3.174±0.00 N/A 3.910±0.00 N/A 3.598±0.00 1.784±0.00 2.142±0.00 N/A 4.639±0.00 N/A N/A
ENST00000407381 4.066±0.00 4.672±0.00 N/A 2.569±0.00 N/A 3.099±0.93 0.374±0.00 N/A 1.352±0.49 N/A N/A 6.180±1.94 8.831±0.00 2.047±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BF CIL_0008BF_0001 VISTA 22:46352708-46954203
CIL_00025D CIL_00025D_0001 CGP 22:46684411-47175699

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0042803 IDA protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045510 tbc1d22a TBC1 domain family, member 22a protein_coding Danio_rerio
ENSMUSG00000051864 Tbc1d22a TBC1 domain family, member 22a protein_coding Mus_musculus

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