C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mucolipin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000055732 MCOLN3 9606 - 1:85018082-85048499 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000341115 MCOLN3-002 85018908-85048446 protein_coding
  ENST00000370587 MCOLN3-006 85024541-85048470 protein_coding
  ENST00000370589 MCOLN3-001 85018082-85048446 protein_coding
  ENST00000474447 MCOLN3-005 85018083-85023520 processed_transcript
  ENST00000475312 MCOLN3-004 85024824-85029959 processed_transcript
  ENST00000490600 MCOLN3-003 85024557-85048499 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341115ENST00000370587ENST00000370589ENST00000474447ENST00000475312ENST00000490600
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341115 N/A N/A N/A N/A 0.445±0.00 0.124±0.00 N/A 0.091±0.00 N/A N/A N/A 0.143±0.10 0.427±0.26 0.389±0.00
ENST00000370587 N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A 0.019±0.00 0.025±0.00 N/A N/A
ENST00000370589 0.300±0.00 N/A N/A 0.052±0.00 0.264±0.00 0.205±0.00 0.081±0.00 1.211±0.00 0.266±0.00 N/A 0.125±0.00 0.235±0.00 0.163±0.02 0.354±0.00
ENST00000474447 0.279±0.00 0.184±0.00 1.606±0.00 0.061±0.00 0.980±0.00 0.107±0.00 0.083±0.05 0.534±0.00 0.110±0.04 1.114±0.02 N/A 0.253±0.17 0.346±0.32 0.737±0.32
ENST00000475312 N/A N/A N/A N/A N/A 0.524±0.00 N/A N/A 0.076±0.00 N/A N/A 0.095±0.00 N/A N/A
ENST00000490600 N/A N/A N/A 0.017±0.00 0.394±0.00 N/A N/A N/A N/A N/A 0.072±0.00 N/A 0.035±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QR CIL_0007QR_0001 VISTA 1:84924957-85525799
CIL_00069E CIL_00069E_0001 CGP 1:84999147-85133138

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005886 TAS plasma membrane
GO:0007626 IEA locomotory behavior
GO:0016021 IEA integral component of membrane
GO:0034220 TAS ion transmembrane transport
GO:0042491 IEA auditory receptor cell differentiation
GO:0055085 TAS transmembrane transport
GO:0070588 TAS calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043034 MCOLN3 (1 of 2) mucolipin 3 protein_coding Danio_rerio
ENSDARG00000078363 mcoln3a mucolipin 3a protein_coding Danio_rerio
ENSMUSG00000036853 Mcoln3 mucolipin 3 protein_coding Mus_musculus

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