C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger CCCH-type containing 11A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000058673 ZC3H11A 9606 + 1:203795654-203854124 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000332127 ZC3H11A-004 203795706-203854124 protein_coding
  ENST00000367210 ZC3H11A-001 203814905-203854118 protein_coding
  ENST00000367212 ZC3H11A-005 203795699-203852430 protein_coding
  ENST00000367214 ZC3H11A-003 203795671-203852420 protein_coding
  ENST00000432282 ZC3H11A-007 203795654-203818665 protein_coding
  ENST00000453771 ZC3H11A-006 203795654-203847687 protein_coding
  ENST00000461980 ZC3H11A-008 203795660-203802261 processed_transcript
  ENST00000466470 ZC3H11A-009 203795654-203802173 processed_transcript
  ENST00000480354 ZC3H11A-010 203829271-203829896 processed_transcript
  ENST00000488411 ZC3H11A-012 203850174-203851122 processed_transcript
  ENST00000492823 ZC3H11A-011 203795686-203796788 processed_transcript
  ENST00000495527 ZC3H11A-002 203798846-203854034 nonsense_mediated_decay
  ENST00000545588 ZC3H11A-201 203799335-203854118 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000332127ENST00000367210ENST00000545588
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000332127 5.180±0.00 3.035±0.00 5.525±0.00 2.451±0.00 5.082±1.70 5.667±1.24 3.849±1.10 6.762±0.00 6.889±0.00 4.839±0.45 2.625±0.22 5.204±1.47 2.565±0.45 13.079±4.78
ENST00000367210 15.291±0.00 13.430±0.00 N/A 7.193±0.00 12.935±0.00 11.050±0.00 6.146±0.00 13.259±0.00 6.049±0.00 19.258±0.00 7.976±0.00 11.580±6.22 6.628±1.09 15.807±0.00
ENST00000545588 N/A 2.517±0.00 4.328±0.00 N/A 9.116±0.00 9.168±0.00 1.894±0.00 2.031±0.12 4.510±3.63 8.747±5.19 0.908±0.00 6.985±4.13 1.017±0.00 4.179±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096T CIL_00096T_0001 VISTA 1:203391843-203993678
CIL_0008W2 CIL_0008W2_0001 VISTA 1:203635137-204239984

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000346 IDA transcription export complex
GO:0005515 IPI protein binding
GO:0016973 IMP poly(A)+ mRNA export from nucleus
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009754 zc3h11a zinc finger CCCH-type containing 11A protein_coding Danio_rerio

Loading