C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SURP and G patch domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000064607 SUGP2 9606 - 19:18990888-19034023 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000330854 SUGP2-007 18990893-19033490 nonsense_mediated_decay
  ENST00000337018 SUGP2-003 18990893-19033559 protein_coding
  ENST00000452918 SUGP2-009 18992349-19033499 protein_coding
  ENST00000593795 SUGP2-013 18990888-19001674 nonsense_mediated_decay
  ENST00000594445 SUGP2-006 19026014-19033434 protein_coding
  ENST00000594773 SUGP2-002 18990890-19033816 nonsense_mediated_decay
  ENST00000597095 SUGP2-016 18990893-18991618 processed_transcript
  ENST00000597163 SUGP2-015 18990893-18993442 processed_transcript
  ENST00000597280 SUGP2-012 18993462-19004269 nonsense_mediated_decay
  ENST00000598202 SUGP2-011 19025557-19033530 processed_transcript
  ENST00000598240 SUGP2-005 18994598-19031030 nonsense_mediated_decay
  ENST00000598863 SUGP2-014 18991268-18993713 processed_transcript
  ENST00000600239 SUGP2-008 18992367-19033496 nonsense_mediated_decay
  ENST00000600377 SUGP2-004 18992925-19033539 protein_coding
  ENST00000601879 SUGP2-001 18992367-19034023 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000337018ENST00000452918ENST00000594773ENST00000598202ENST00000598240ENST00000600377ENST00000601879
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000337018 1.817±0.00 N/A N/A 7.861±2.05 0.976±0.00 2.115±0.00 4.480±2.63 N/A N/A 2.697±0.00 7.257±0.00 13.141±0.00 38.159±15.96
ENST00000452918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.001±0.00 2.056±0.00 N/A
ENST00000594773 N/A 3.597±0.00 2.688±0.00 N/A 2.378±0.08 3.037±0.00 0.968±0.00 N/A 1.279±0.00 1.941±0.00 1.342±0.00 4.555±2.06 27.060±0.00
ENST00000598202 N/A N/A N/A N/A N/A 13.598±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000598240 N/A N/A N/A N/A N/A N/A 4.505±0.00 N/A N/A 3.984±0.00 N/A N/A N/A
ENST00000600377 N/A N/A 1.023±0.00 N/A N/A 2.592±0.00 N/A N/A N/A N/A N/A 1.478±0.00 N/A
ENST00000601879 0.924±0.00 N/A N/A N/A 1.587±0.00 1.151±0.00 N/A 0.713±0.00 N/A 1.866±0.00 N/A 4.502±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006396 IEA RNA processing
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000036054 Sugp2 SURP and G patch domain containing 2 protein_coding Mus_musculus

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