C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adenosine deaminase, tRNA-specific 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000065457 ADAT1 9606 - 16:75596981-75623300 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000307921 ADAT1-001 75600002-75623300 protein_coding
  ENST00000562374 ADAT1-005 75620769-75623259 protein_coding
  ENST00000564657 ADAT1-006 75617237-75622783 protein_coding
  ENST00000565109 ADAT1-007 75617225-75623275 processed_transcript
  ENST00000566445 ADAT1-002 75599100-75622466 nonsense_mediated_decay
  ENST00000566450 ADAT1-010 75598133-75608957 protein_coding
  ENST00000567281 ADAT1-008 75612804-75623281 protein_coding
  ENST00000568001 ADAT1-009 75612788-75623281 nonsense_mediated_decay
  ENST00000568478 ADAT1-004 75599877-75602003 processed_transcript
  ENST00000568510 ADAT1-011 75596981-75603134 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000307921ENST00000564657ENST00000566445ENST00000568001
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000307921 N/A N/A 1.790±0.00 N/A N/A 0.966±0.00 1.547±0.00 N/A 1.276±0.00 9.291±5.37
ENST00000564657 N/A N/A N/A 5.453±0.00 N/A N/A N/A N/A N/A N/A
ENST00000566445 2.005±0.00 1.939±0.11 N/A 1.136±0.25 0.891±0.73 1.249±0.00 N/A 1.670±0.00 1.982±0.65 3.780±0.00
ENST00000568001 N/A N/A N/A N/A 0.795±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GX CIL_0001GX_0001 CGP 16:75566351-75623300
CIL_0002D7 CIL_0002D7_0001 CGP 16:75596981-75648643

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA:IMP RNA binding
GO:0004000 IEA adenosine deaminase activity
GO:0006396 IEA RNA processing
GO:0008033 IMP tRNA processing
GO:0008251 IMP tRNA-specific adenosine deaminase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061348 adat1 adenosine deaminase, tRNA-specific 1 protein_coding Danio_rerio
ENSMUSG00000031949 Adat1 adenosine deaminase, tRNA-specific 1 protein_coding Mus_musculus

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