C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: echinoderm microtubule associated protein like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000066629 EML1 9606 + 14:99737693-99942060 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262233 EML1-001 99793338-99942060 protein_coding
  ENST00000327921 EML1-003 99772949-99940324 protein_coding
  ENST00000334192 EML1-002 99793343-99941537 protein_coding
  ENST00000553313 EML1-020 99936167-99940174 retained_intron
  ENST00000553720 EML1-011 99809451-99865597 protein_coding
  ENST00000554111 EML1-005 99906872-99915412 retained_intron
  ENST00000554386 EML1-016 99898233-99911551 protein_coding
  ENST00000554479 EML1-004 99737693-99909416 protein_coding
  ENST00000554553 EML1-018 99897242-99910322 nonsense_mediated_decay
  ENST00000555096 EML1-009 99793413-99878521 nonsense_mediated_decay
  ENST00000555145 EML1-006 99737749-99878552 protein_coding
  ENST00000555277 EML1-015 99894453-99900982 retained_intron
  ENST00000555812 EML1-017 99899412-99911438 processed_transcript
  ENST00000556199 EML1-007 99773704-99865611 protein_coding
  ENST00000556714 EML1-010 99793435-99900979 protein_coding
  ENST00000556758 EML1-013 99850850-99883546 processed_transcript
  ENST00000556835 EML1-008 99792684-99878517 protein_coding
  ENST00000556947 EML1-012 99839042-99865630 protein_coding
  ENST00000557313 EML1-019 99914576-99939231 nonsense_mediated_decay
  ENST00000557741 EML1-014 99865609-99886105 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262233ENST00000334192ENST00000553313ENST00000554479ENST00000555096ENST00000555812ENST00000556714
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262233 N/A N/A 1.045±0.00 N/A 1.530±0.01 N/A N/A N/A 2.565±0.00 1.021±0.00 N/A 0.469±0.00 N/A N/A
ENST00000334192 3.622±0.00 6.654±0.00 N/A 3.455±0.29 3.714±0.00 5.494±3.03 5.871±0.00 3.324±0.00 1.451±0.56 3.542±0.00 3.008±0.00 1.074±0.67 3.786±1.70 3.639±2.01
ENST00000553313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.149±0.00 N/A N/A N/A
ENST00000554479 N/A N/A N/A N/A N/A 1.276±0.00 N/A N/A N/A 3.249±0.00 N/A 0.771±0.02 5.652±0.00 2.326±0.00
ENST00000555096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.607±0.00 N/A N/A
ENST00000555812 N/A N/A 8.243±0.00 N/A 9.503±0.00 7.374±0.00 13.644±0.00 4.135±0.00 28.500±0.00 14.599±0.00 9.413±0.00 1.623±0.00 10.580±0.00 9.484±0.00
ENST00000556714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.756±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CK CIL_0009CK_0001 VISTA 14:99273315-99877989
CIL_0003HG CIL_0003HG_0001 CGP 14:99684304-99942060
CIL_0003HN CIL_0003HN_0001 CGP 14:99737693-100144236

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000226 ISS microtubule cytoskeleton organization
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0005509 NAS calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005829 ISS cytosol
GO:0005874 IEA microtubule
GO:0005875 TAS microtubule associated complex
GO:0007052 ISS mitotic spindle organization
GO:0007405 ISS neuroblast proliferation
GO:0007420 ISS brain development
GO:0008017 ISS microtubule binding
GO:0015631 IDA tubulin binding
GO:0097431 ISS mitotic spindle pole
GO:1990023 ISS mitotic spindle midzone

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042840 eml1 echinoderm microtubule associated protein like 1 protein_coding Danio_rerio
ENSMUSG00000058070 Eml1 echinoderm microtubule associated protein like 1 protein_coding Mus_musculus

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