C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neogenin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000067141 NEO1 9606 + 15:73051710-73305206 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261908 NEO1-201 73052484-73305206 protein_coding
  ENST00000339362 NEO1-001 73051710-73305205 protein_coding
  ENST00000558485 NEO1-005 73122634-73126623 retained_intron
  ENST00000558807 NEO1-009 73254717-73259111 retained_intron
  ENST00000558886 NEO1-011 73298299-73301550 retained_intron
  ENST00000558964 NEO1-004 73052610-73302718 protein_coding
  ENST00000560262 NEO1-003 73052610-73302718 protein_coding
  ENST00000560328 NEO1-002 73135985-73305198 protein_coding
  ENST00000560352 NEO1-008 73221693-73249641 processed_transcript
  ENST00000560407 NEO1-006 73221919-73244482 processed_transcript
  ENST00000560808 NEO1-010 73289074-73302933 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261908ENST00000339362ENST00000558964ENST00000560262ENST00000560328ENST00000560808
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261908 N/A N/A N/A 5.234±4.56 1.186±0.00 N/A N/A 1.595±0.00 0.217±0.00 0.612±0.00 N/A 2.051±1.86 0.393±0.00 6.291±2.83
ENST00000339362 N/A N/A N/A N/A N/A N/A 0.511±0.00 N/A 0.252±0.00 N/A N/A N/A 0.145±0.00 N/A
ENST00000558964 N/A N/A 2.329±0.00 1.975±0.00 1.569±0.00 N/A 1.089±0.32 1.143±0.00 3.551±0.00 2.452±0.00 2.741±1.10 1.167±0.72 0.341±0.00 N/A
ENST00000560262 N/A 2.785±0.00 N/A 1.778±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560328 1.550±0.00 3.941±0.00 N/A 7.896±0.00 2.680±0.00 5.845±0.00 0.982±0.60 3.006±2.05 1.018±0.00 3.201±1.94 4.483±0.00 4.346±4.25 0.376±0.00 6.301±5.35
ENST00000560808 N/A N/A N/A N/A N/A N/A N/A 1.354±0.00 N/A N/A N/A 2.984±0.00 3.714±0.00 18.615±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005DF CIL_0005DF_0002 CGP 15:72751369-73305206

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007155 IEA cell adhesion
GO:0007411 TAS axon guidance
GO:0007520 IEA myoblast fusion
GO:0016021 IEA integral component of membrane
GO:0042692 TAS muscle cell differentiation
GO:0045296 IEA cadherin binding
GO:0051149 TAS positive regulation of muscle cell differentiation
GO:0055072 IGI iron ion homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008937 neo1 neogenin 1 protein_coding Danio_rerio
ENSDARG00000075100 NEO1 (2 of 2) neogenin 1 protein_coding Danio_rerio
ENSMUSG00000032340 Neo1 neogenin protein_coding Mus_musculus

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