C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, Ca++ transporting, plasma membrane 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000067842 ATP2B3 9606 + X:153517676-153582939 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263519 ATP2B3-201 153536122-153582929 protein_coding
  ENST00000349466 ATP2B3-002 153517676-153580589 protein_coding
  ENST00000359149 ATP2B3-006 153536122-153580589 protein_coding
  ENST00000370186 ATP2B3-001 153517676-153582939 protein_coding
  ENST00000393842 ATP2B3-004 153532934-153569962 protein_coding
  ENST00000460549 ATP2B3-003 153556946-153560824 processed_transcript
  ENST00000496610 ATP2B3-005 153569648-153580569 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000263519ENST00000359149ENST00000370186ENST00000393842ENST00000496610
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000263519 N/A 0.022±0.00 N/A 3.593±1.72 0.015±0.01 N/A 0.011±0.00 N/A 0.003±0.00 N/A 0.058±0.02 0.156±0.00
ENST00000359149 N/A N/A 0.051±0.00 2.960±0.00 N/A N/A N/A N/A N/A 0.218±0.00 N/A N/A
ENST00000370186 N/A N/A N/A 6.101±0.00 N/A 0.139±0.00 N/A N/A N/A N/A 0.063±0.00 0.023±0.00
ENST00000393842 0.006±0.00 N/A N/A N/A N/A 0.048±0.00 N/A 0.168±0.00 N/A 0.026±0.00 N/A 0.167±0.00
ENST00000496610 N/A N/A N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001V0 CIL_0001V0_0001 CGP X:153494939-153582939
CIL_0007GH CIL_0007GH_0002 CGP X:153517676-153600045

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0006810 TAS transport
GO:0007596 TAS blood coagulation
GO:0008152 IEA metabolic process
GO:0008219 IEA cell death
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0031982 IDA vesicle
GO:0034220 TAS ion transmembrane transport
GO:0046872 IEA metal ion binding
GO:0055085 TAS transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023445 atp2b3b ATPase, Ca++ transporting, plasma membrane 3b protein_coding Danio_rerio
ENSDARG00000043474 atp2b3a ATPase, Ca++ transporting, plasma membrane 3a protein_coding Danio_rerio
ENSMUSG00000031376 Atp2b3 ATPase, Ca++ transporting, plasma membrane 3 protein_coding Mus_musculus

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