C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 7A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000068724 TTC7A 9606 + 2:46916157-47076137 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319190 TTC7A-001 46941174-47076135 protein_coding
  ENST00000394850 TTC7A-002 46941286-47075324 protein_coding
  ENST00000409245 TTC7A-005 46916157-47074048 protein_coding
  ENST00000409825 TTC7A-006 46950421-47076137 nonsense_mediated_decay
  ENST00000440051 TTC7A-010 47005932-47049980 nonsense_mediated_decay
  ENST00000441914 TTC7A-004 46941543-47073923 nonsense_mediated_decay
  ENST00000461601 TTC7A-003 46941275-47050025 processed_transcript
  ENST00000474321 TTC7A-009 46978118-47005994 processed_transcript
  ENST00000484061 TTC7A-008 46994231-47075324 retained_intron
  ENST00000484337 TTC7A-011 47034155-47060956 processed_transcript
  ENST00000491786 TTC7A-007 46978740-47075557 retained_intron
  ENST00000496991 TTC7A-012 47046315-47050827 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderKidneyLungOvaryPlacentaTestisENST00000319190ENST00000394850ENST00000461601
Transcript ID Adrenal Bladder Kidney Lung Ovary Placenta Testis
ENST00000319190 8.658±0.00 N/A 8.315±0.00 11.974±0.00 9.545±0.00 8.417±1.80 13.309±0.00
ENST00000394850 N/A 2.459±0.00 N/A N/A N/A N/A N/A
ENST00000461601 N/A N/A N/A N/A N/A N/A 32.494±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KK CIL_0006KK_0001 CGP 2:46698952-46941855
CIL_0008D2 CIL_0008D2_0001 VISTA 2:46768636-47372293
CIL_0003T5 CIL_0003T5_0002 CGP 2:46901870-47076137
CIL_0003T6 CIL_0003T6_0002 CGP 2:46916157-47155378

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006879 IEA cellular iron ion homeostasis
GO:0030097 IEA hemopoiesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074760 ttc7a tetratricopeptide repeat domain 7A protein_coding Danio_rerio
ENSMUSG00000036918 Ttc7 tetratricopeptide repeat domain 7 protein_coding Mus_musculus

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