C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FERM and PDZ domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000070601 FRMPD1 9606 + 9:37651000-37746904 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359927 FRMPD1-003 37669778-37707502 protein_coding
  ENST00000377765 FRMPD1-001 37651000-37746904 protein_coding
  ENST00000539465 FRMPD1-002 37668005-37746904 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359927ENST00000377765
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359927 0.061±0.00 0.347±0.00 N/A N/A 0.134±0.00 0.098±0.00 0.090±0.00 0.054±0.00 0.162±0.00 0.062±0.00 N/A 0.153±0.06 0.140±0.04 N/A
ENST00000377765 N/A N/A 0.040±0.00 0.443±0.25 0.074±0.00 0.183±0.15 0.187±0.14 0.282±0.00 0.018±0.00 0.035±0.01 0.628±0.00 0.071±0.02 0.043±0.01 2.361±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TI CIL_0006TI_0001 CGP 9:37651000-37778972

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079074 FRMPD1 FERM and PDZ domain containing 1 protein_coding Danio_rerio
ENSDARG00000087008 CU638740.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090827 BX088718.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000091264 FERM and PDZ domain containing 1 protein_coding Danio_rerio
ENSDARG00000091472 FERM and PDZ domain containing 1 protein_coding Danio_rerio
ENSMUSG00000035615 Frmpd1 FERM and PDZ domain containing 1 protein_coding Mus_musculus

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