C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000071205 ARHGAP10 9606 + 4:147732063-148072780 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000336498 ARHGAP10-001 147732063-148072780 protein_coding
  ENST00000506020 ARHGAP10-005 147946239-148072776 retained_intron
  ENST00000506054 ARHGAP10-003 147860983-148072776 retained_intron
  ENST00000507661 ARHGAP10-004 147881867-148072775 protein_coding
  ENST00000510076 ARHGAP10-007 148065240-148072376 processed_transcript
  ENST00000510379 ARHGAP10-002 147732063-147858488 retained_intron
  ENST00000513548 ARHGAP10-006 148023054-148063277 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000336498ENST00000506054ENST00000507661
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000336498 8.191±0.00 4.524±0.00 0.510±0.00 3.250±2.30 6.210±3.90 12.432±0.00 9.231±1.67 2.589±0.00 14.357±13.47 3.393±0.00 7.643±4.44 6.618±1.71 7.168±3.73 10.094±4.18
ENST00000506054 N/A N/A 0.269±0.00 0.079±0.00 0.573±0.00 0.896±0.00 0.868±0.00 0.113±0.00 3.852±0.00 N/A N/A N/A N/A N/A
ENST00000507661 2.629±0.00 3.572±0.00 N/A 0.396±0.00 5.433±0.00 8.075±0.00 2.928±0.00 3.055±0.00 N/A 2.310±0.00 5.913±0.00 4.553±2.56 3.263±0.84 3.982±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XF CIL_0008XF_0001 VISTA 4:147181569-147782559
CIL_0008OE CIL_0008OE_0001 VISTA 4:147195167-147795934
CIL_0008H5 CIL_0008H5_0001 VISTA 4:147235170-147835800
CIL_0001PD CIL_0001PD_0002 CGP 4:147637785-148072780
CIL_0006M2 CIL_0006M2_0002 CGP 4:147732063-148444698

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005100 IEA Rho GTPase activator activity
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0005886 IEA plasma membrane
GO:0006915 TAS apoptotic process
GO:0007010 IEA cytoskeleton organization
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0042981 TAS regulation of apoptotic process
GO:0043066 IEA negative regulation of apoptotic process
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078326 arhgap10 Rho GTPase activating protein 10 protein_coding Danio_rerio
ENSMUSG00000037148 Arhgap10 Rho GTPase activating protein 10 protein_coding Mus_musculus

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