C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sel-1 suppressor of lin-12-like (C. elegans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000071537 SEL1L 9606 - 14:81471549-81533861 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000336735 SEL1L-001 81471549-81533861 protein_coding
  ENST00000554293 SEL1L-006 81479278-81484528 retained_intron
  ENST00000554744 SEL1L-007 81498358-81506155 retained_intron
  ENST00000555824 SEL1L-003 81498808-81533833 protein_coding
  ENST00000555923 SEL1L-005 81488797-81490473 retained_intron
  ENST00000557372 SEL1L-004 81504263-81533849 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000336735ENST00000554744
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000336735 10.265±0.00 4.573±0.00 4.780±0.00 7.261±1.68 13.359±0.00 7.405±2.67 4.337±0.21 7.515±1.54 8.895±1.41 6.900±3.42 3.131±1.42 3.764±2.28 4.932±0.90 3.444±0.65
ENST00000554744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.519±0.00 N/A 5.580±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087I CIL_00087I_0001 VISTA 14:81013259-81617678
CIL_0000TE CIL_0000TE_0001 CGP 14:81260656-81533861

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0007219 IEA Notch signaling pathway
GO:0016021 IEA integral component of membrane
GO:0034976 IEA response to endoplasmic reticulum stress

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004581 sel1l sel-1 suppressor of lin-12-like (C. elegans) protein_coding Danio_rerio
ENSMUSG00000020964 Sel1l sel-1 suppressor of lin-12-like (C. elegans) protein_coding Mus_musculus

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