C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nudE neurodevelopment protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000072864 NDE1 9606 + 16:15643267-15726353 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342673 NDE1-201 15664723-15726353 protein_coding
  ENST00000396354 NDE1-001 15650227-15726353 protein_coding
  ENST00000396355 NDE1-002 15643267-15726353 protein_coding
  ENST00000570727 NDE1-004 15650247-15677944 protein_coding
  ENST00000571896 NDE1-015 15721637-15725134 processed_transcript
  ENST00000572503 NDE1-011 15721493-15724291 processed_transcript
  ENST00000572756 NDE1-005 15650247-15691324 nonsense_mediated_decay
  ENST00000572967 NDE1-013 15691242-15724222 protein_coding
  ENST00000573203 NDE1-003 15650257-15691219 nonsense_mediated_decay
  ENST00000573694 NDE1-014 15691163-15724222 protein_coding
  ENST00000574109 NDE1-008 15687427-15699930 protein_coding
  ENST00000574163 NDE1-006 15672663-15687468 retained_intron
  ENST00000576502 NDE1-009 15691200-15700491 protein_coding
  ENST00000577101 NDE1-007 15677925-15696766 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000342673
Transcript ID Brain
ENST00000342673 0.838±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UO CIL_0006UO_0001 CGP 16:15594386-15726353
CIL_0006MU CIL_0006MU_0001 CGP 16:15643267-15857033

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000132 IMP establishment of mitotic spindle orientation
GO:0000278 TAS mitotic cell cycle
GO:0000776 IDA kinetochore
GO:0001764 IEA neuron migration
GO:0005515 IPI protein binding
GO:0005813 IDA centrosome
GO:0005815 IEA microtubule organizing center
GO:0005819 IEA spindle
GO:0005829 TAS cytosol
GO:0005874 IEA microtubule
GO:0007020 IEA microtubule nucleation
GO:0007067 IEA mitotic nuclear division
GO:0007405 IEA neuroblast proliferation
GO:0008017 ISS microtubule binding
GO:0016020 IDA membrane
GO:0019904 IEA protein domain specific binding
GO:0021987 IMP cerebral cortex development
GO:0030900 IEA forebrain development
GO:0031023 IEA microtubule organizing center organization
GO:0031616 ISS spindle pole centrosome
GO:0042802 IEA identical protein binding
GO:0047496 IEA vesicle transport along microtubule
GO:0051298 ISS centrosome duplication
GO:0051303 IMP establishment of chromosome localization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037900 nde1 nudE nuclear distribution gene E homolog 1 (A. nidulans) protein_coding Danio_rerio
ENSMUSG00000022678 Nde1 nuclear distribution gene E homolog 1 (A nidulans) protein_coding Mus_musculus

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