C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: minichromosome maintenance complex component 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000073111 MCM2 9606 + 3:127598223-127622436 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265056 MCM2-001 127598223-127622436 protein_coding
  ENST00000468414 MCM2-010 127617711-127621776 processed_transcript
  ENST00000468659 MCM2-009 127604251-127606202 processed_transcript
  ENST00000472731 MCM2-008 127599102-127604708 protein_coding
  ENST00000473785 MCM2-011 127616978-127617821 retained_intron
  ENST00000474964 MCM2-002 127598410-127621829 nonsense_mediated_decay
  ENST00000477668 MCM2-003 127599479-127621829 nonsense_mediated_decay
  ENST00000480910 MCM2-007 127598862-127604783 protein_coding
  ENST00000491422 MCM2-005 127604896-127622107 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265056ENST00000468659ENST00000474964ENST00000491422
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265056 1.522±0.00 3.041±0.00 N/A 1.491±0.89 2.228±0.90 1.560±0.83 1.217±0.88 1.760±1.14 1.049±0.05 0.606±0.00 2.296±1.08 6.516±1.11 19.626±8.53 9.147±0.33
ENST00000468659 N/A N/A 3.002±0.00 N/A 5.649±0.00 N/A N/A N/A N/A N/A N/A 8.700±0.00 N/A N/A
ENST00000474964 N/A N/A N/A N/A N/A N/A 0.696±0.00 N/A N/A N/A N/A 6.006±0.00 15.952±0.00 4.143±0.00
ENST00000491422 N/A N/A N/A N/A 0.631±0.00 0.854±0.00 N/A N/A N/A N/A 0.690±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EC CIL_0008EC_0001 VISTA 3:127070872-127672749

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0000785 IDA chromatin
GO:0003677 TAS:IEA DNA binding
GO:0003678 IEA DNA helicase activity
GO:0003688 IEA DNA replication origin binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005664 IEA nuclear origin of replication recognition complex
GO:0005737 IDA cytoplasm
GO:0006260 TAS:IEA DNA replication
GO:0006268 IEA DNA unwinding involved in DNA replication
GO:0006270 IEA:IMP DNA replication initiation
GO:0006271 TAS DNA strand elongation involved in DNA replication
GO:0006334 IEA nucleosome assembly
GO:0007049 TAS cell cycle
GO:0015630 IDA microtubule cytoskeleton
GO:0015979 IEA photosynthesis
GO:0015995 IEA chlorophyll biosynthetic process
GO:0016851 IEA magnesium chelatase activity
GO:0016887 IEA ATPase activity
GO:0032508 IEA DNA duplex unwinding
GO:0042393 IEA histone binding
GO:0042555 IEA:IDA MCM complex
GO:0046872 IEA metal ion binding
GO:0071353 IEA cellular response to interleukin-4

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015911 mcm2 MCM2 minichromosome maintenance deficient 2, mitotin (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000002870 Mcm2 minichromosome maintenance deficient 2 mitotin (S. cerevisiae) protein_coding Mus_musculus

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