C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: alpha-kinase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000073331 ALPK1 9606 + 4:112285509-112442620 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000177648 ALPK1-001 112297370-112441812 protein_coding
  ENST00000426472 ALPK1-012 112297396-112353012 processed_transcript
  ENST00000458497 ALPK1-201 112297343-112442606 protein_coding
  ENST00000502366 ALPK1-009 112297379-112343584 processed_transcript
  ENST00000504176 ALPK1-202 112297343-112442606 protein_coding
  ENST00000504488 ALPK1-011 112297385-112316305 retained_intron
  ENST00000504745 ALPK1-007 112382504-112442620 retained_intron
  ENST00000505127 ALPK1-005 112297382-112441664 nonsense_mediated_decay
  ENST00000505176 ALPK1-010 112297369-112343276 processed_transcript
  ENST00000505912 ALPK1-003 112410915-112415117 processed_transcript
  ENST00000508589 ALPK1-015 112425051-112427649 processed_transcript
  ENST00000509209 ALPK1-014 112423788-112425963 retained_intron
  ENST00000509688 ALPK1-002 112297391-112384846 retained_intron
  ENST00000509722 ALPK1-008 112297380-112441371 nonsense_mediated_decay
  ENST00000512847 ALPK1-016 112426506-112428111 retained_intron
  ENST00000514594 ALPK1-017 112285509-112315851 processed_transcript
  ENST00000515106 ALPK1-013 112297401-112412445 nonsense_mediated_decay
  ENST00000515330 ALPK1-006 112297396-112425693 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000177648ENST00000458497ENST00000504176ENST00000504745ENST00000505127ENST00000509688ENST00000509722
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000177648 N/A N/A N/A 1.067±0.00 1.283±0.00 N/A N/A N/A 1.697±0.55 N/A N/A 0.993±0.00 N/A
ENST00000458497 2.548±0.00 N/A N/A 0.734±0.00 N/A 0.612±0.00 0.809±0.39 N/A 1.587±0.00 0.375±0.00 1.735±1.27 0.835±0.09 0.696±0.00
ENST00000504176 N/A N/A 0.240±0.00 0.842±0.00 N/A N/A N/A N/A N/A 0.427±0.00 1.054±0.00 N/A 0.652±0.19
ENST00000504745 N/A 0.741±0.00 N/A 0.668±0.00 0.856±0.00 N/A 0.696±0.00 N/A N/A N/A 0.421±0.00 N/A N/A
ENST00000505127 N/A N/A 1.275±0.00 N/A N/A N/A N/A N/A N/A 0.266±0.00 1.771±0.00 1.150±0.00 0.759±0.00
ENST00000509688 N/A N/A N/A 1.581±0.00 1.543±0.00 N/A 0.739±0.00 1.044±0.00 1.998±0.00 N/A 1.264±0.00 N/A N/A
ENST00000509722 N/A N/A N/A 0.841±0.08 N/A 0.368±0.00 N/A 0.479±0.00 N/A 0.760±0.00 N/A N/A 0.425±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007P9 CIL_0007P9_0001 UCNEbase 4:110617607-112523533
CIL_00080F CIL_00080F_0001 VISTA 4:111826456-112428336
CIL_0008WR CIL_0008WR_0001 VISTA 4:112221234-112822374

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0016301 IEA kinase activity
GO:0016310 IEA phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059741 ALPK1 alpha-kinase 1 protein_coding Danio_rerio
ENSMUSG00000028028 Alpk1 alpha-kinase 1 protein_coding Mus_musculus

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