C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: embryonic ectoderm development
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000074266 EED 9606 + 11:86244544-86278813 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263360 EED-001 86244544-86278736 protein_coding
  ENST00000327320 EED-003 86245140-86278735 protein_coding
  ENST00000351625 EED-014 86245223-86278813 protein_coding
  ENST00000524673 EED-008 86267895-86278578 retained_intron
  ENST00000525244 EED-004 86245268-86277535 retained_intron
  ENST00000527888 EED-009 86276132-86278739 protein_coding
  ENST00000528180 EED-002 86244753-86278707 protein_coding
  ENST00000528250 EED-011 86277098-86278739 retained_intron
  ENST00000533228 EED-010 86263945-86268530 retained_intron
  ENST00000534564 EED-007 86263945-86278554 retained_intron
  ENST00000534595 EED-006 86245234-86278361 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263360ENST00000327320ENST00000351625ENST00000525244ENST00000527888ENST00000528180ENST00000528250ENST00000533228
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263360 0.707±0.00 2.161±0.00 N/A N/A 2.367±0.00 3.422±0.00 2.482±0.00 1.572±1.26 1.447±0.00 N/A 2.524±0.00 3.168±2.19 2.293±0.42 4.891±2.60
ENST00000327320 N/A N/A 0.578±0.00 0.705±0.20 N/A N/A 0.557±0.00 N/A 1.884±1.49 1.581±0.32 N/A 2.353±1.47 0.825±0.00 4.052±0.00
ENST00000351625 0.716±0.00 N/A 0.588±0.00 0.679±0.00 2.071±0.00 1.582±0.00 N/A 1.479±0.00 1.826±0.00 N/A 0.400±0.00 2.526±1.01 2.178±0.87 N/A
ENST00000525244 0.660±0.00 N/A 1.260±0.00 1.333±0.87 3.622±0.00 2.840±0.00 N/A 0.569±0.00 N/A N/A 0.576±0.00 3.381±0.77 N/A 3.061±0.00
ENST00000527888 N/A N/A N/A N/A N/A N/A N/A 0.474±0.00 N/A N/A N/A N/A N/A N/A
ENST00000528180 0.937±0.00 3.104±0.00 N/A 0.977±0.00 3.484±0.00 1.808±0.35 1.209±0.37 4.558±0.00 0.620±0.00 1.628±0.00 0.811±0.00 3.270±1.83 3.931±2.22 3.476±0.00
ENST00000528250 N/A N/A N/A 0.704±0.00 1.116±0.00 N/A N/A N/A N/A 0.813±0.00 N/A 1.294±0.00 N/A N/A
ENST00000533228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.512±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001739 IEA sex chromatin
GO:0003682 IEA chromatin binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0006349 IEA regulation of gene expression by genetic imprinting
GO:0006351 IEA transcription, DNA-templated
GO:0016571 IEA histone methylation
GO:0035098 IDA ESC/E(Z) complex
GO:0042054 IDA histone methyltransferase activity
GO:0042802 IPI identical protein binding
GO:0045120 IEA pronucleus
GO:0045892 NAS negative regulation of transcription, DNA-templated
GO:0061087 IEA positive regulation of histone H3-K27 methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040548 eed embryonic ectoderm development protein_coding Danio_rerio
ENSMUSG00000030619 Eed embryonic ectoderm development protein_coding Mus_musculus

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