C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BC1 (ubiquinol-cytochrome c reductase) synthesis-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000074582 BCS1L 9606 + 2:218658764-218663443 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359273 BCS1L-003 218659656-218663443 protein_coding
  ENST00000392109 BCS1L-001 218659709-218663443 protein_coding
  ENST00000392110 BCS1L-002 218659714-218663442 protein_coding
  ENST00000392111 BCS1L-007 218659735-218663443 protein_coding
  ENST00000412366 BCS1L-004 218659737-218663443 protein_coding
  ENST00000423377 BCS1L-013 218659717-218661416 protein_coding
  ENST00000426649 BCS1L-018 218661950-218663442 protein_coding
  ENST00000428880 BCS1L-008 218658764-218661217 protein_coding
  ENST00000430322 BCS1L-009 218658805-218661916 protein_coding
  ENST00000431802 BCS1L-006 218659772-218663442 protein_coding
  ENST00000436603 BCS1L-019 218662197-218663442 protein_coding
  ENST00000439945 BCS1L-005 218659760-218663404 protein_coding
  ENST00000443791 BCS1L-011 218659656-218662602 protein_coding
  ENST00000456050 BCS1L-010 218659376-218661916 protein_coding
  ENST00000460579 BCS1L-017 218661851-218663414 retained_intron
  ENST00000465706 BCS1L-020 218661918-218663441 processed_transcript
  ENST00000471576 BCS1L-015 218661064-218662540 retained_intron
  ENST00000477422 BCS1L-016 218661666-218663413 retained_intron
  ENST00000490188 BCS1L-012 218659659-218660598 retained_intron
  ENST00000493376 BCS1L-014 218660867-218661514 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000359273ENST00000392110ENST00000392111ENST00000412366ENST00000426649ENST00000431802ENST00000439945ENST00000443791ENST00000471576ENST00000490188ENST00000493376
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000359273 N/A N/A N/A N/A N/A 7.188±0.00 13.920±0.00 3.139±0.00 N/A N/A N/A 4.704±0.00
ENST00000392110 N/A N/A N/A N/A N/A N/A 3.258±0.00 N/A N/A N/A N/A N/A
ENST00000392111 N/A N/A N/A 1.445±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412366 N/A N/A 1.497±0.00 N/A 3.270±0.00 N/A N/A N/A 3.102±0.00 N/A 9.675±0.00 7.935±1.90
ENST00000426649 N/A N/A N/A N/A N/A N/A N/A 4.961±0.00 N/A N/A N/A N/A
ENST00000431802 3.252±0.00 N/A N/A N/A 1.464±0.43 N/A 0.738±0.00 N/A N/A N/A N/A N/A
ENST00000439945 N/A N/A N/A N/A N/A N/A N/A 2.031±0.00 N/A N/A 18.786±0.00 N/A
ENST00000443791 N/A N/A 10.425±7.53 N/A 3.203±0.00 1.939±0.00 N/A N/A N/A 6.049±0.00 N/A N/A
ENST00000471576 N/A 3.721±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490188 N/A N/A N/A N/A N/A N/A 1.623±0.00 N/A N/A N/A N/A N/A
ENST00000493376 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.187±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AR CIL_0000AR_0002 CGP 2:218607765-218659655
CIL_0000AQ CIL_0000AQ_0002 CGP 2:218637916-218663443
CIL_000654 CIL_000654_0001 CGP 2:218658764-218672411

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003724 IEA RNA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005750 TAS mitochondrial respiratory chain complex III
GO:0007005 IMP mitochondrion organization
GO:0032981 IMP mitochondrial respiratory chain complex I assembly
GO:0033617 IMP mitochondrial respiratory chain complex IV assembly
GO:0034551 IMP mitochondrial respiratory chain complex III assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012295 bcs1l BCS1-like (yeast) protein_coding Danio_rerio
ENSMUSG00000026172 Bcs1l BCS1-like (yeast) protein_coding Mus_musculus

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