C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000076053 RBM7 9606 + 11:114400030-114414203 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000375490 RBM7-002 114400529-114408924 protein_coding
  ENST00000538134 RBM7-008 114400700-114402195 retained_intron
  ENST00000540163 RBM7-001 114400030-114410607 protein_coding
  ENST00000541475 RBM7-003 114400607-114412018 protein_coding
  ENST00000542140 RBM7-004 114400666-114408909 nonsense_mediated_decay
  ENST00000544313 RBM7-005 114400613-114407819 nonsense_mediated_decay
  ENST00000544582 RBM7-006 114400666-114414203 protein_coding
  ENST00000545678 RBM7-007 114400674-114408123 protein_coding
  ENST00000624815 RBM7-201 114400529-114410610 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375490ENST00000540163ENST00000541475ENST00000545678
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375490 6.413±0.00 4.087±0.00 2.114±0.00 3.320±0.25 5.500±3.62 N/A 2.610±0.54 5.463±2.92 1.852±0.00 5.753±1.30 3.705±0.00 N/A
ENST00000540163 2.343±0.00 3.021±0.00 1.235±0.14 2.761±0.00 N/A 2.748±1.14 1.587±0.00 2.040±0.88 1.123±0.70 3.407±0.57 2.716±0.62 7.206±2.31
ENST00000541475 N/A N/A N/A N/A 0.760±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000545678 N/A N/A N/A 6.844±0.00 N/A N/A N/A N/A N/A 10.117±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus
GO:0044822 IDA poly(A) RNA binding
GO:0051321 IEA meiotic cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020841 RBM7 RNA binding motif protein 7 protein_coding Danio_rerio
ENSMUSG00000042396 Rbm7 RNA binding motif protein 7 protein_coding Mus_musculus

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