C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: voltage-dependent anion channel 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000078668 VDAC3 9606 + 8:42391624-42405897 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000022615 VDAC3-003 42391903-42405897 protein_coding
  ENST00000518495 VDAC3-009 42391902-42401901 nonsense_mediated_decay
  ENST00000518563 VDAC3-008 42391624-42401886 protein_coding
  ENST00000519072 VDAC3-004 42391887-42397599 retained_intron
  ENST00000520115 VDAC3-006 42391846-42401959 protein_coding
  ENST00000521158 VDAC3-002 42391903-42405488 protein_coding
  ENST00000521348 VDAC3-010 42391890-42402164 retained_intron
  ENST00000522010 VDAC3-013 42394210-42403441 nonsense_mediated_decay
  ENST00000522069 VDAC3-014 42391856-42401940 protein_coding
  ENST00000522178 VDAC3-012 42399550-42401905 retained_intron
  ENST00000522572 VDAC3-015 42391864-42405749 protein_coding
  ENST00000524291 VDAC3-011 42403032-42405415 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000022615ENST00000521158ENST00000522572
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000022615 21.136±0.00 30.610±0.00 3.328±0.00 33.750±17.89 21.751±12.82 21.663±12.83 36.590±29.30 37.213±25.66 13.785±7.72 12.060±5.24 36.592±3.78 31.478±14.43 27.627±11.49 54.976±22.35
ENST00000521158 N/A N/A N/A 13.496±0.00 N/A N/A 19.273±5.34 N/A 4.404±0.00 2.692±0.00 21.524±4.38 15.105±0.00 10.291±0.00 31.624±0.00
ENST00000522572 5.370±0.00 N/A N/A 35.305±0.00 13.863±0.00 12.989±0.00 23.451±0.00 N/A N/A N/A 16.202±0.00 N/A N/A 21.391±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0006820 IEA anion transport
GO:0008308 IEA:TAS voltage-gated anion channel activity
GO:0015288 IEA porin activity
GO:0015853 TAS adenine transport
GO:0044070 IEA regulation of anion transport
GO:0046930 IEA pore complex
GO:0055085 IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003695 vdac3 voltage-dependent anion channel 3 protein_coding Danio_rerio
ENSDARG00000021564 VDAC3 (2 of 4) voltage-dependent anion channel 3 protein_coding Danio_rerio
ENSDARG00000073775 VDAC3 (3 of 4) voltage-dependent anion channel 3 protein_coding Danio_rerio
ENSDARG00000089647 VDAC3 (4 of 4) voltage-dependent anion channel 3 protein_coding Danio_rerio
ENSMUSG00000008892 Vdac3 voltage-dependent anion channel 3 protein_coding Mus_musculus
ENSMUSG00000075053 Vdac3-ps1 voltage-dependent anion channel 3, pseudogene 1 protein_coding Mus_musculus

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