C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tensin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000079308 TNS1 9606 - 2:217799789-218002995 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000171887 TNS1-001 217799789-217944128 protein_coding
  ENST00000310858 TNS1-008 217859229-217903813 protein_coding
  ENST00000413280 TNS1-013 217893473-217978934 protein_coding
  ENST00000413554 TNS1-006 217848884-217905461 protein_coding
  ENST00000419504 TNS1-004 217803866-217920209 protein_coding
  ENST00000423413 TNS1-015 217897795-217937162 protein_coding
  ENST00000430930 TNS1-005 217803866-217920209 protein_coding
  ENST00000439083 TNS1-016 217895041-217902009 protein_coding
  ENST00000446688 TNS1-009 217802789-217842160 protein_coding
  ENST00000446903 TNS1-002 217848176-218002995 protein_coding
  ENST00000449814 TNS1-014 217897893-217944070 protein_coding
  ENST00000453356 TNS1-020 217879292-217885810 protein_coding
  ENST00000465306 TNS1-012 217986740-217991029 processed_transcript
  ENST00000479185 TNS1-011 217848356-217885880 retained_intron
  ENST00000480416 TNS1-021 217809714-217810304 retained_intron
  ENST00000480665 TNS1-018 217848472-217858633 processed_transcript
  ENST00000490566 TNS1-010 217803798-217814016 retained_intron
  ENST00000492338 TNS1-017 217890328-217895056 retained_intron
  ENST00000495556 TNS1-019 217813709-217815368 retained_intron
  ENST00000611415 TNS1-201 217803446-217944005 protein_coding
  ENST00000615025 TNS1-202 217803446-217944005 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000171887ENST00000310858ENST00000413554ENST00000430930ENST00000615025
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000171887 25.110±0.00 3.489±0.00 4.294±4.09 66.277±54.86 91.912±0.00 42.927±33.89 10.425±9.45 78.841±0.00 16.865±0.00 9.861±0.00 13.015±10.90 5.757±0.00 29.402±26.82
ENST00000310858 N/A N/A N/A N/A N/A N/A 3.612±0.00 N/A N/A N/A N/A N/A N/A
ENST00000413554 N/A N/A N/A 25.618±0.00 27.729±0.00 13.759±0.00 N/A N/A 28.961±0.00 N/A N/A N/A N/A
ENST00000430930 N/A N/A 0.506±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615025 N/A 6.214±0.00 N/A N/A N/A 3.227±0.00 2.672±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WL CIL_0007WL_0001 VISTA 2:217636448-218238840
CIL_0005MB CIL_0005MB_0001 CGP 2:217799789-218090581

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005925 IDA focal adhesion
GO:0007044 IEA cell-substrate junction assembly
GO:0010761 IEA fibroblast migration
GO:0030055 IEA cell-substrate junction
GO:0035556 IEA intracellular signal transduction
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020845 tns1 tensin 1 protein_coding Danio_rerio
ENSDARG00000078842 TNS1 (2 of 2) tensin 1 protein_coding Danio_rerio
ENSMUSG00000055322 Tns1 tensin 1 protein_coding Mus_musculus

Loading