C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: secretion associated, Ras related GTPase 1A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000079332 SAR1A 9606 - 10:70147289-70170523 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373236 SAR1A-004 70157675-70161915 protein_coding
  ENST00000373238 SAR1A-003 70150204-70163031 protein_coding
  ENST00000373239 SAR1A-002 70161645-70170512 protein_coding
  ENST00000373241 SAR1A-001 70150204-70170523 protein_coding
  ENST00000373242 SAR1A-007 70147289-70170523 protein_coding
  ENST00000431664 SAR1A-201 70150223-70161915 protein_coding
  ENST00000452767 SAR1A-005 70152150-70157823 protein_coding
  ENST00000477464 SAR1A-006 70161284-70161931 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373236ENST00000373238ENST00000373241ENST00000373242ENST00000431664
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373236 N/A N/A 22.343±0.00 33.430±0.00 N/A 34.777±0.00 15.306±0.00 38.095±0.00 N/A 42.631±0.00 33.022±0.00 N/A N/A N/A
ENST00000373238 N/A 3.985±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.464±0.00 N/A N/A
ENST00000373241 53.609±0.00 21.648±0.00 4.272±0.00 15.005±0.13 65.111±0.00 16.352±7.64 8.886±3.81 12.807±4.15 17.039±1.57 25.012±8.06 7.539±3.18 17.664±9.91 27.118±10.86 19.321±9.45
ENST00000373242 N/A 3.412±0.00 0.662±0.00 3.975±2.63 7.418±0.00 N/A 1.159±0.53 1.959±0.00 1.698±0.00 N/A N/A 2.354±1.06 N/A 1.558±0.00
ENST00000431664 N/A N/A N/A N/A 14.091±0.00 N/A 3.828±0.00 10.913±0.00 N/A N/A 5.421±0.00 8.526±0.05 6.313±0.84 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PY CIL_0000PY_0002 CGP 10:70137981-70170523
CIL_0004JC CIL_0004JC_0002 CGP 10:70147289-70233911

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006886 IEA intracellular protein transport
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007264 IEA small GTPase mediated signal transduction
GO:0016192 IEA vesicle-mediated transport
GO:0016529 IEA sarcoplasmic reticulum
GO:0019001 IEA guanyl nucleotide binding
GO:0031683 IEA G-protein beta/gamma-subunit complex binding
GO:0070062 IDA extracellular vesicular exosome
GO:1901301 IEA regulation of cargo loading into COPII-coated vesicle
GO:1901303 IEA negative regulation of cargo loading into COPII-coated vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033320 sar1ab SAR1 gene homolog Ab (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000020088 Sar1a SAR1 gene homolog A (S. cerevisiae) protein_coding Mus_musculus

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