C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 5 open reading frame 22
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000082213 C5orf22 9606 + 5:31532266-31555058 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000325366 C5orf22-001 31532266-31555058 protein_coding
  ENST00000504464 C5orf22-009 31532316-31545714 nonsense_mediated_decay
  ENST00000504866 C5orf22-004 31545671-31554839 processed_transcript
  ENST00000507818 C5orf22-006 31532295-31535893 protein_coding
  ENST00000510530 C5orf22-008 31538173-31545714 retained_intron
  ENST00000510659 C5orf22-002 31532287-31554808 nonsense_mediated_decay
  ENST00000511208 C5orf22-005 31532299-31538684 nonsense_mediated_decay
  ENST00000513967 C5orf22-003 31532289-31551394 nonsense_mediated_decay
  ENST00000515409 C5orf22-007 31532295-31534597 retained_intron
  ENST00000517780 C5orf22-010 31532295-31538686 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000325366ENST00000504464ENST00000504866ENST00000507818ENST00000510530ENST00000510659ENST00000511208ENST00000517780
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000325366 0.511±0.00 1.035±0.00 1.659±0.00 3.969±1.89 0.939±0.51 0.973±0.00 1.422±0.78 1.535±0.55 1.345±0.56 0.936±0.00 2.062±0.67 2.093±1.41 1.343±0.14 0.527±0.00
ENST00000504464 N/A N/A N/A N/A 2.912±0.00 4.285±0.00 N/A N/A N/A 1.737±0.00 N/A N/A N/A N/A
ENST00000504866 0.771±0.00 0.985±0.00 N/A 1.643±0.00 1.143±0.00 0.490±0.00 N/A 1.035±0.00 1.993±0.00 0.820±0.00 N/A 3.661±2.42 2.744±1.98 0.897±0.27
ENST00000507818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.202±0.00 N/A N/A N/A
ENST00000510530 N/A N/A N/A N/A N/A 2.790±0.00 N/A N/A N/A N/A N/A 4.791±0.00 4.432±0.00 2.392±0.00
ENST00000510659 1.843±0.00 0.711±0.00 N/A 1.680±0.00 0.703±0.00 1.496±0.00 2.244±0.00 0.752±0.00 N/A 0.467±0.00 4.183±0.00 1.121±0.00 0.961±0.35 1.502±0.00
ENST00000511208 N/A N/A N/A N/A N/A N/A N/A 2.913±0.00 N/A N/A N/A N/A N/A N/A
ENST00000517780 N/A N/A N/A 5.200±0.00 4.401±0.00 4.052±0.00 1.203±0.00 2.469±0.00 4.531±0.00 3.911±0.00 1.604±0.00 4.338±1.65 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008013 IEA beta-catenin binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011723 C2H5orf22 chromosome 5 open reading frame 22 protein_coding Danio_rerio
ENSMUSG00000022195 6030458C11Rik RIKEN cDNA 6030458C11 gene protein_coding Mus_musculus

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